RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SEC23BQ15437 767 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 MICAQ29983 383 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 ZNF630Q2M218 657 aaPredicted RBP11.13□□□□□ -0.63
PDE6C-201ENST00000371447 CLEC12AQ5QGZ9 265 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 ACOT4Q8N9L9 421 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 OR4D11Q8NGI4 311 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 SLC9A6Q92581 669 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 RAB7BQ96AH8 199 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 APOOQ9BUR5 198 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 RBCK1Q9BYM8 510 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 MCOLN1Q9GZU1 580 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 RSPH9Q9H1X1 276 aaPredicted RBP11.13□□□□□ -0.63
PDE6C-201ENST00000371447 ARHGEF17Q96PE2 2063 aaPredicted RBP11.13□□□□□ -0.63
PDE6C-201ENST00000371447 CABIN1Q9Y6J0 2220 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 A0A1W2PR48 441 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 LRIT2A6NDA9 550 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 FFAR1O14842 300 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 HMGN2P05204 90 aaKnown RBP11.13□□□□□ -0.63
PDE6C-201ENST00000371447 CCDC159P0C7I6 412 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 ITGAMP11215 1152 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 TMBIM6P55061 237 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 FCHO2Q0JRZ9 810 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 HYAL1Q12794 435 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 MAP4K2Q12851 820 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 COMTD1Q86VU5 262 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 GPR32P1Q8NGA4 272 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 OR9A2Q8NGT5 310 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 OR1E3Q8WZA6 343 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 CXorf40BQ96DE9 158 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 SLC35G5Q96KT7 338 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 AICDAQ9GZX7 198 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 SLC6A20Q9NP91 592 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 TVP23BQ9NYZ1 205 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 NDRG2Q9UN36 371 aaKnown RBP11.13□□□□□ -0.63
PDE6C-201ENST00000371447 ICKQ9UPZ9 632 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 NTNG1Q9Y2I2 539 aa11.13□□□□□ -0.63
PDE6C-201ENST00000371447 CLDN24A6NM45 220 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 HMGN4O00479 90 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 CLPXO76031 633 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 CH25HO95992 272 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 ARAFP10398 606 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 RPL3P39023 403 aaKnown RBP11.12□□□□□ -0.63
PDE6C-201ENST00000371447 MC3RP41968 323 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 ADPRHP54922 357 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 C6orf132Q5T0Z8 1188 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 RBM12BQ8IXT5 1001 aaKnown RBP11.12□□□□□ -0.63
PDE6C-201ENST00000371447 ZHX1-C8orf76Q96EF9 292 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 SMAD5Q99717 465 aaKnown RBP11.12□□□□□ -0.63
PDE6C-201ENST00000371447 TPK1Q9H3S4 243 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 SERHL2Q9H4I8 314 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 MVB12BQ9H7P6 319 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 TDRD6O60522 2096 aaKnown RBP11.12□□□□□ -0.63
PDE6C-201ENST00000371447 FRYLO94915 3013 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 LINC00854A0A1B0GVQ3 168 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 ZW10O43264 779 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 PDE7AQ13946 482 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 RPE65Q16518 533 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 CTF1Q16619 201 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 TIGD6Q17RP2 521 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 TRIM48Q8IWZ4 208 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 IL17RCQ8NAC3 791 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 FBXO15Q8NCQ5 510 aaPredicted RBP11.12□□□□□ -0.63
PDE6C-201ENST00000371447 GGHQ92820 318 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 SRMSQ9H3Y6 488 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 SLC35C2Q9NQQ7 365 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 DNAAF2Q9NVR5 837 aaKnown RBP11.12□□□□□ -0.63
PDE6C-201ENST00000371447 MKLN1Q9UL63 735 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 PADI2Q9Y2J8 665 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 HCN4Q9Y3Q4 1203 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 ENPP4Q9Y6X5 453 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 SERTM1A2A2V5 107 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 SEMA7AO75326 666 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 SEMG1P04279 462 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 ITGA2P17301 1181 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 TYRP1P17643 537 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 GADD45AP24522 165 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 NTSR1P30989 418 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 NTSP30990 170 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 PXNP49023 591 aaPredicted RBP11.12□□□□□ -0.63
PDE6C-201ENST00000371447 FADDQ13158 208 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 DNASE1L3Q13609 305 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 FAHD1Q6P587 224 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 GPR155Q7Z3F1 870 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 ZNF614Q8N883 585 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 TP53I13Q8NBR0 393 aaPredicted RBP11.12□□□□□ -0.63
PDE6C-201ENST00000371447 RLN3Q8WXF3 142 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 OR5P2Q8WZ92 322 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 FKBP10Q96AY3 582 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 EPYCQ99645 322 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 TEX101Q9BY14 249 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 BTBD1Q9H0C5 482 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 OR51E2Q9H255 320 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 ENPP5Q9UJA9 477 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 ACSL5Q9ULC5 683 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 GPR52Q9Y2T5 361 aa11.12□□□□□ -0.63
PDE6C-201ENST00000371447 ARID1BQ8NFD5 2236 aaPredicted RBP11.12□□□□□ -0.63
PDE6C-201ENST00000371447 DOCK8Q8NF50 2099 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 PRAMEF27A3QJZ7 478 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 CPSF4LA6NMK7 179 aaKnown RBP11.11□□□□□ -0.63
PDE6C-201ENST00000371447 EFCAB9A8MZ26 197 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms