RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 A0A1W2PS29 197 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 PORP16435 677 aaPredicted RBP13.83□□□□□ -0.2
COL9A1-204ENST00000370496 CSNK2A2P19784 350 aaPredicted RBP13.83□□□□□ -0.2
COL9A1-204ENST00000370496 TACR1P25103 407 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 HPCAL1P37235 193 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 FEN1P39748 380 aaKnown RBP13.83□□□□□ -0.2
COL9A1-204ENST00000370496 ERVK-8P63133 956 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 ARG2P78540 354 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 MAD2L1Q13257 205 aaPredicted RBP13.83□□□□□ -0.2
COL9A1-204ENST00000370496 SPRED3Q2MJR0 410 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 ZNF750Q32MQ0 723 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 C6orf136Q5SQH8 315 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 FAM71E1Q6IPT2 247 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 FAM180BQ6P0A1 224 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 TICAM1Q8IUC6 712 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 CRLF3Q8IUI8 442 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 SAMD14Q8IZD0 417 aaPredicted RBP13.83□□□□□ -0.2
COL9A1-204ENST00000370496 LRRC25Q8N386 305 aaPredicted RBP13.83□□□□□ -0.2
COL9A1-204ENST00000370496 LIX1Q8N485 282 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 ZADH2Q8N4Q0 377 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 GFM2Q969S9 779 aaKnown RBP13.83□□□□□ -0.2
COL9A1-204ENST00000370496 FBXL20Q96IG2 436 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 ZNF354BQ96LW1 612 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 ZBTB20Q9HC78 741 aaPredicted RBP13.83□□□□□ -0.2
COL9A1-204ENST00000370496 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL9A1-204ENST00000370496 CES1P1Q9UKY3 287 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 PPIEQ9UNP9 301 aaKnown RBP13.83□□□□□ -0.2
COL9A1-204ENST00000370496 ERVK-19Q9WJR5 959 aa13.83□□□□□ -0.2
COL9A1-204ENST00000370496 WBP11Q9Y2W2 641 aaKnown RBP13.83□□□□□ -0.2
COL9A1-204ENST00000370496 HEMK1Q9Y5R4 338 aaPredicted RBP13.83□□□□□ -0.2
COL9A1-204ENST00000370496 BSNQ9UPA5 3926 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 DYTNA2CJ06 578 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 TRPC5OSA6NMA1 111 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 SLCO1B7G3V0H7 640 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 HDAC3O15379 428 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 VPS4BO75351 444 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 LRATO95237 230 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 DDAH2O95865 285 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 BCKDHAP12694 445 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 NTSP30990 170 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 ASMTP46597 345 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 KLRB1Q12918 225 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 ZNF267Q14586 743 aaPredicted RBP13.82□□□□□ -0.2
COL9A1-204ENST00000370496 MEP1AQ16819 746 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 ACER2Q5QJU3 275 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 HSDL2Q6YN16 418 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 RNF111Q6ZNA4 994 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 DGAT2L6Q6ZPD8 337 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 ARFGAP2Q8N6H7 521 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 TEX19Q8NA77 164 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 OR1N1Q8NGS0 311 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 DOK4Q8TEW6 326 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 THAP3Q8WTV1 239 aaPredicted RBP13.82□□□□□ -0.2
COL9A1-204ENST00000370496 BBS4Q96RK4 519 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 MFRPQ9BY79 579 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 BRINP2Q9C0B6 783 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 CXorf21Q9HAI6 301 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 SLC35C2Q9NQQ7 365 aa13.82□□□□□ -0.2
COL9A1-204ENST00000370496 NOP53Q9NZM5 478 aaKnown RBP13.82□□□□□ -0.2
COL9A1-204ENST00000370496 EIF3LQ9Y262 564 aaKnown RBP13.82□□□□□ -0.2
COL9A1-204ENST00000370496 TLN1Q9Y490 2541 aaKnown RBP13.81□□□□□ -0.2
COL9A1-204ENST00000370496 SMG1Q96Q15 3661 aaKnown RBP13.81□□□□□ -0.2
COL9A1-204ENST00000370496 CROCCQ5TZA2 2017 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 FCHO1O14526 889 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 ATP8B1O43520 1251 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 AKAP10O43572 662 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 F10P00742 488 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 ATP1B1P05026 303 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 GALNSP34059 522 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 PTGER1P34995 402 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 CASRP41180 1078 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 CD97P48960 835 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 IL23RQ5VWK5 629 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 IGFL3Q6UXB1 125 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 LGI4Q8N135 537 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 BEST3Q8N1M1 668 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 VWA5B2Q8N398 1253 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 ZNF321PQ8N8H1 164 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.81□□□□□ -0.2
COL9A1-204ENST00000370496 PIWIL2Q8TC59 973 aaKnown RBP13.81□□□□□ -0.2
COL9A1-204ENST00000370496 ZNF721Q8TF20 911 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 PPCDCQ96CD2 204 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 CNRIP1Q96F85 164 aaPredicted RBP13.81□□□□□ -0.2
COL9A1-204ENST00000370496 EGLN2Q96KS0 407 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 C7orf26Q96N11 449 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 AKTIPQ9H8T0 292 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 MEAF6Q9HAF1 191 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 BAIAP2L1Q9UHR4 511 aa13.81□□□□□ -0.2
COL9A1-204ENST00000370496 ZNF223Q9UK11 482 aaPredicted RBP13.81□□□□□ -0.2
COL9A1-204ENST00000370496 GABRR3A8MPY1 467 aa13.8□□□□□ -0.2
COL9A1-204ENST00000370496 HRKO00198 91 aa13.8□□□□□ -0.2
COL9A1-204ENST00000370496 ZFAND5O76080 213 aa13.8□□□□□ -0.2
COL9A1-204ENST00000370496 PRPS2P11908 318 aa13.8□□□□□ -0.2
COL9A1-204ENST00000370496 DDX5P17844 614 aaKnown RBP13.8□□□□□ -0.2
COL9A1-204ENST00000370496 GPR143P51810 404 aa13.8□□□□□ -0.2
COL9A1-204ENST00000370496 PTGR1Q14914 329 aa13.8□□□□□ -0.2
COL9A1-204ENST00000370496 LTB4RQ15722 352 aa13.8□□□□□ -0.2
COL9A1-204ENST00000370496 SMU1Q2TAY7 513 aa13.8□□□□□ -0.2
COL9A1-204ENST00000370496 NADK2Q4G0N4 442 aa13.8□□□□□ -0.2
COL9A1-204ENST00000370496 COLEC12Q5KU26 742 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms