RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SLAMF1Q13291 335 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 EXOC3L2Q2M3D2 409 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 SYT6Q5T7P8 510 aaPredicted RBP13.26□□□□□ -0.29
USF1-202ENST00000368020 TNFAIP8L2Q6P589 184 aaPredicted RBP13.26□□□□□ -0.29
USF1-202ENST00000368020 ACOT4Q8N9L9 421 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 TMEM145Q8NBT3 493 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 MIPOL1Q8TD10 442 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 NR4A3Q92570 626 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 GAL3ST3Q96A11 431 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 MRGPRX1Q96LB2 322 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 NECAB3Q96P71 396 aaPredicted RBP13.26□□□□□ -0.29
USF1-202ENST00000368020 DCUN1D5Q9BTE7 237 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 NECTIN3Q9NQS3 549 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 PAK1IP1Q9NWT1 392 aaPredicted RBP13.26□□□□□ -0.29
USF1-202ENST00000368020 SEC14L3Q9UDX4 400 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 SIT1Q9Y3P8 196 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 DGKBQ9Y6T7 804 aa13.26□□□□□ -0.29
USF1-202ENST00000368020 ISM1B1AKI9 464 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 ZW10O43264 779 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 ADAP00813 363 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 FHP07954 510 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 ZNF10P21506 573 aaPredicted RBP13.25□□□□□ -0.29
USF1-202ENST00000368020 AKT2P31751 481 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 KRT20P35900 424 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 NCBP2P52298 156 aaKnown RBP eCLIP13.25□□□□□ -0.29
USF1-202ENST00000368020 CDC42P60953 191 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 PPP2CBP62714 309 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 PPP2CAP67775 309 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 GAS6Q14393 721 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 TOR1AIP1Q5JTV8 583 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 ENPP7Q6UWV6 458 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 ZNF793Q6ZN11 406 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 ENTHD1Q8IYW4 607 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 SMYD1Q8NB12 490 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 FAR1Q8WVX9 515 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 APOBEC4Q8WW27 367 aaKnown RBP13.25□□□□□ -0.29
USF1-202ENST00000368020 ALPK1Q96QP1 1244 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 FUNDC2Q9BWH2 189 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 DGCR6LQ9BY27 220 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 ABCG4Q9H172 646 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 SRMSQ9H3Y6 488 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 GLIPR2Q9H4G4 154 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 BCL2L10Q9HD36 194 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 FZD3Q9NPG1 666 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 PRDM7Q9NQW5 492 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 ZCCHC3Q9NUD5 404 aaKnown RBP13.25□□□□□ -0.29
USF1-202ENST00000368020 TRNAU1APQ9NX07 287 aaKnown RBP13.25□□□□□ -0.29
USF1-202ENST00000368020 IMPAD1Q9NX62 359 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 CALML5Q9NZT1 146 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 KLF15Q9UIH9 416 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 SLC9A8Q9Y2E8 581 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 ASB4Q9Y574 426 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 SNRNP200O75643 2136 aaKnown RBP13.25□□□□□ -0.29
USF1-202ENST00000368020 A0A1W2PPW3 197 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 STK25O00506 426 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 FAAHO00519 579 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 CASC3O15234 703 aaKnown RBP13.25□□□□□ -0.29
USF1-202ENST00000368020 ASNA1O43681 348 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 SLC28A2O43868 658 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 PCDHGA12O60330 932 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 SLC35G6P0C7Q6 338 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 NR2F1P10589 423 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 CSNK2A2P19784 350 aaPredicted RBP13.25□□□□□ -0.29
USF1-202ENST00000368020 CBLP22681 906 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 KCNJ5P48544 419 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 RELAQ04206 551 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 HYAL2Q12891 473 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 CEBPEQ15744 281 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 SLC48A1Q6P1K1 146 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 PLD3Q8IV08 490 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 RHOXF1Q8NHV9 184 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 FAM81AQ8TBF8 368 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 NT5CQ8TCD5 201 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 OR1E3Q8WZA6 343 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 DHRS1Q96LJ7 313 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 TRIM45Q9H8W5 580 aaPredicted RBP13.25□□□□□ -0.29
USF1-202ENST00000368020 C3orf14Q9HBI5 128 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 PALMDQ9NP74 551 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 PHF11Q9UIL8 331 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 MGAT4BQ9UQ53 548 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 PLEKHM1Q9Y4G2 1056 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 PCDHGA10Q9Y5H3 936 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 GPC6Q9Y625 555 aaPredicted RBP13.25□□□□□ -0.29
USF1-202ENST00000368020 HS3ST3A1Q9Y663 406 aa13.25□□□□□ -0.29
USF1-202ENST00000368020 TCRBV21S2A2A0A5A6 115 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 SH3D21A4FU49 640 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 FAM221BA6H8Z2 402 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 POM121BA6NF01 834 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 WBP4O75554 376 aaKnown RBP13.24□□□□□ -0.29
USF1-202ENST00000368020 GABARAPO95166 117 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 F3P13726 295 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 GABRG2P18507 467 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 NDUFV2P19404 249 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 TNFRSF1BP20333 461 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 PEBP1P30086 187 aaKnown RBP13.24□□□□□ -0.29
USF1-202ENST00000368020 MOGQ16653 247 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 DUSP7Q16829 419 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 FGD3Q5JSP0 725 aa13.24□□□□□ -0.29
USF1-202ENST00000368020 KIAA1324Q6UXG2 1013 aaKnown RBP13.24□□□□□ -0.29
USF1-202ENST00000368020 PAQR7Q86WK9 346 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms