RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PPIL1Q9Y3C6 166 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 OR51B4Q9Y5P0 310 aa10.97□□□□□ -0.65
USF1-201ENST00000368019 IQCMA0A1B0GVH7 501 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 A0A1W2PQ67 120 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 C10orf142B7Z368 130 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 H0YIV9 168 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 GFYI3L273 518 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 PSMD11O00231 422 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 FLRT2O43155 660 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 SEC14L5O43304 696 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 LGI1O95970 557 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 SPNP16150 400 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 BPIP17213 487 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 GRK5P34947 590 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 LIMS1P48059 325 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 SGSHP51688 502 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 AFF3P51826 1226 aaKnown RBP10.96□□□□□ -0.65
USF1-201ENST00000368019 OR2B6P58173 313 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 CDC42P60953 191 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 RIPPLY1Q0D2K3 151 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 GPR50Q13585 617 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 RGNQ15493 299 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 TMEM201Q5SNT2 666 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.96□□□□□ -0.65
USF1-201ENST00000368019 GRHL2Q6ISB3 625 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 FAM151BQ6UXP7 276 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 ZNF621Q6ZSS3 439 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 UBE2R2Q712K3 238 aaPredicted RBP10.96□□□□□ -0.65
USF1-201ENST00000368019 VN1R5Q7Z5H4 357 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 ANKRD46Q86W74 232 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 CACUL1Q86Y37 369 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 RAB43Q86YS6 212 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 ZNF366Q8N895 744 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 WDR20Q8TBZ3 569 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 WFDC5Q8TCV5 224 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 TRIM63Q969Q1 353 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 CEP19Q96LK0 163 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 SMIM14Q96QK8 99 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 SDHCQ99643 169 aaPredicted RBP10.96□□□□□ -0.65
USF1-201ENST00000368019 CDC6Q99741 560 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 BOCQ9BWV1 1114 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 BHLHE41Q9C0J9 482 aaPredicted RBP10.96□□□□□ -0.65
USF1-201ENST00000368019 CCDC86Q9H6F5 360 aaKnown RBP10.96□□□□□ -0.65
USF1-201ENST00000368019 RUBCNLQ9H714 662 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 RMI1Q9H9A7 625 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 ZNF556Q9HAH1 456 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 FBRSQ9HAH7 460 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 SMURF1Q9HCE7 757 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 FZD3Q9NPG1 666 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 ABCB8Q9NUT2 735 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 NDUFAF4Q9P032 175 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 DKK4Q9UBT3 224 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 ATP6V1HQ9UI12 483 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 VPS51Q9UID3 782 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 FZD4Q9ULV1 537 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 STUB1Q9UNE7 303 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 BTBD3Q9Y2F9 522 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 SNX11Q9Y5W9 270 aa10.96□□□□□ -0.65
USF1-201ENST00000368019 COL5A1P20908 1838 aaPredicted RBP10.95□□□□□ -0.66
USF1-201ENST00000368019 ANKRD34BA5PLL1 514 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 ZAR1LA6NP61 321 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 TMEM229AB2RXF0 380 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 KIAA0513O60268 411 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 SEMA4FO95754 770 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 PTHP01270 115 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 CBLP22681 906 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 C21orf33P30042 268 aaPredicted RBP10.95□□□□□ -0.66
USF1-201ENST00000368019 CD70P32970 193 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 SEPHS1P49903 392 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 SNRPGP62308 76 aaKnown RBP10.95□□□□□ -0.66
USF1-201ENST00000368019 BCL2L1Q07817 233 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 ST3GAL4Q11206 333 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 LAPTM4AQ15012 233 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 CDK10Q15131 360 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 CHRNA6Q15825 494 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 FNDC3BQ53EP0 1204 aaKnown RBP10.95□□□□□ -0.66
USF1-201ENST00000368019 SPIN4Q56A73 249 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 CRB2Q5IJ48 1285 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 RETSATQ6NUM9 610 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 TSEN54Q7Z6J9 526 aaKnown RBP10.95□□□□□ -0.66
USF1-201ENST00000368019 ATCAYQ86WG3 371 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 LIX1LQ8IVB5 337 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 SYTL1Q8IYJ3 562 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 LGI4Q8N135 537 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 ASCC1Q8N9N2 400 aaKnown RBP10.95□□□□□ -0.66
USF1-201ENST00000368019 OR52N2Q8NGI0 321 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 GRPEL2Q8TAA5 225 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 RHBDD1Q8TEB9 315 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 CAPSLQ8WWF8 208 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 GEMIN6Q8WXD5 167 aaKnown RBP10.95□□□□□ -0.66
USF1-201ENST00000368019 ASB11Q8WXH4 323 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 ALG14Q96F25 216 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 Q96MT0 163 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 KCNC2Q96PR1 638 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 OR2A14Q96R47 310 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 FEVQ99581 238 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 COPS8Q99627 209 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 MGLLQ99685 303 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 OR51E2Q9H255 320 aa10.95□□□□□ -0.66
USF1-201ENST00000368019 CLN6Q9NWW5 311 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms