RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 GRHPRQ9UBQ7 328 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 VILLO15195 856 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 PLOD3O60568 738 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 PENKP01210 267 aaPredicted RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 C8BP07358 591 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 TACSTD2P09758 323 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 LAMP1P11279 417 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 GBX2P52951 348 aaPredicted RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 COQ5Q5HYK3 327 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 ZNF551Q7Z340 670 aaPredicted RBP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 OR2L2Q8NH16 312 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 KHSRPQ92945 711 aaKnown RBP eCLIP11.05□□□□□ -0.64
SYNE1-204ENST00000367248 TRIM8Q9BZR9 551 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 ACTR10Q9NZ32 417 aa11.05□□□□□ -0.64
SYNE1-204ENST00000367248 hCG_1807616A0A1W2PRN6 198 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 GJB3O75712 270 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 RPLP0P05388 317 aaKnown RBP11.04□□□□□ -0.64
SYNE1-204ENST00000367248 TSPAN5P62079 268 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 ANKFN1Q8N957 763 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 TMCO6Q96DC7 493 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 SLC6A18Q96N87 628 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 THAP10Q9P2Z0 257 aaPredicted RBP11.04□□□□□ -0.64
SYNE1-204ENST00000367248 SCAMP2O15127 329 aaKnown RBP11.04□□□□□ -0.64
SYNE1-204ENST00000367248 CSN2P05814 226 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 PTGER1P34995 402 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 ETV4P43268 484 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 NUDT6P53370 316 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 OR12D2P58182 307 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 TFF2Q03403 129 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 BLMHQ13867 455 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 NFATC4Q14934 902 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 ADNP2Q6IQ32 1131 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 SGCDQ92629 289 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 MSLNLQ96KJ4 702 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 YTHDF1Q9BYJ9 559 aaKnown RBP11.04□□□□□ -0.64
SYNE1-204ENST00000367248 OR6C2Q9NZP2 312 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 BTAF1O14981 1849 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 PRSS38A1L453 326 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 TLX2O43763 284 aaPredicted RBP11.04□□□□□ -0.64
SYNE1-204ENST00000367248 SSNA1O43805 119 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 FARS2O95363 451 aaKnown RBP11.04□□□□□ -0.64
SYNE1-204ENST00000367248 SOX14O95416 240 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 OR1E2P47887 323 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 RPS3AP61247 264 aaKnown RBP11.04□□□□□ -0.64
SYNE1-204ENST00000367248 ARHGAP19Q14CB8 494 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 NPTX1Q15818 432 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 C5orf22Q49AR2 442 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 MSANTD1Q6ZTZ1 278 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 COMMD9Q9P000 198 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 PEX16Q9Y5Y5 336 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 PRSS21Q9Y6M0 314 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 TFECO14948 347 aaPredicted RBP11.04□□□□□ -0.64
SYNE1-204ENST00000367248 PLATP00750 562 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 HTR1EP28566 365 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 CCR7P32248 378 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 SLC9A3P48764 834 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 AFF3P51826 1226 aaKnown RBP11.04□□□□□ -0.64
SYNE1-204ENST00000367248 TAS2R38P59533 333 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 SEMA3BQ13214 749 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 CBFBQ13951 182 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 TPRG1LQ5T0D9 272 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 ZSCAN4Q8NAM6 433 aaPredicted RBP11.04□□□□□ -0.64
SYNE1-204ENST00000367248 NUP98P52948 1817 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 H3BML4 177 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 RDH16O75452 317 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 ADRA1AP35348 466 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 SNU13P55769 128 aaKnown RBP11.04□□□□□ -0.64
SYNE1-204ENST00000367248 RCAN2Q14206 197 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 RNF220Q5VTB9 566 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 HACD2Q6Y1H2 254 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 OR2L3Q8NG85 312 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 C16orf78Q8WTQ4 265 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 ARRDC1-AS1Q9H2J1 176 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 SH3D21A4FU49 640 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 TRIM64A6NGJ6 449 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 AQP9O43315 295 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 LAPTM4AQ15012 233 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 LINC00696Q6ZRV3 163 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 PPP1R3BQ86XI6 285 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 LIX1LQ8IVB5 337 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 CNTN4Q8IWV2 1026 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 MINDY1Q8N5J2 469 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 PDPRQ8NCN5 879 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 CRELD1Q96HD1 420 aa11.04□□□□□ -0.64
SYNE1-204ENST00000367248 PAK6Q9NQU5 681 aaPredicted RBP11.04□□□□□ -0.64
SYNE1-204ENST00000367248 SLC35F4A4IF30 521 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 F3P13726 295 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 UGT3A2Q3SY77 523 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 PLET1Q6UQ28 207 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 OR52E1Q8NGJ3 308 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 DOHHQ9BU89 302 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 GSTO2Q9H4Y5 243 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 TIGARQ9NQ88 270 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 ACSL6Q9UKU0 697 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 A0A1W2PRG6 482 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 YY2O15391 372 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 OR1D4P47884 311 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 MVKQ03426 396 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 IL18Q14116 193 aa11.03□□□□□ -0.64
SYNE1-204ENST00000367248 SHQ1Q6PI26 577 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms