RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 TNFP01375 233 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 HRGP04196 525 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 IL1R2P27930 398 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 DAOAP59103 153 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 NKPD1Q17RQ9 610 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 PCGF3Q3KNV8 242 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 TREML2Q5T2D2 321 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 PRSS55Q6UWB4 352 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 FAM46BQ96A09 425 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 HINT2Q9BX68 163 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 CD244Q9BZW8 370 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 UNKLQ9H9P5 680 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 GFOD1Q9NXC2 390 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 SMIM35A0A1B0GVV1 85 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 WNT9AO14904 365 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 KNG1P01042 644 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 PCSK2P16519 638 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 SSTR4P31391 388 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 CLCNKAP51800 687 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 DEFA6Q01524 100 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 SNTA1Q13424 505 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 ARHGAP40Q5TG30 622 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 FAM205BPQ63HN1 556 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 ZNF705AQ6ZN79 300 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 NOXA1Q86UR1 476 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 GLIS1Q8NBF1 620 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.58□□□□□ -0.725e-8■■■■□ 23.5
GTF3C1-201ENST00000356183 PIP5K1AQ99755 562 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 SRA1Q9HD15 236 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 FANCFQ9NPI8 374 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 TMEM98Q9Y2Y6 226 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 ZNF175Q9Y473 711 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 NME7Q9Y5B8 376 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 CAPNS1P04632 268 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 ADRB3P13945 408 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 GPR4P46093 362 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 TGM4P49221 684 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 RAB8AP61006 207 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 COL9A2Q14055 689 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 RFTN1Q14699 578 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 FCRLBQ6BAA4 426 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 TICAM1Q8IUC6 712 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 SNX27Q96L92 541 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 ASB6Q9NWX5 421 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 PLEKHM1Q9Y4G2 1056 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 SC5DO75845 299 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 CLDN7O95471 211 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 CBSLP0DN79 551 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 RPL17P18621 184 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 CBSP35520 551 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 ABHD18Q0P651 414 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 BTN1A1Q13410 526 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 ZNF630Q2M218 657 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 NATD1Q8N6N6 113 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 CAMKVQ8NCB2 501 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 ZNF681Q96N22 645 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 FCRL5Q96RD9 977 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 TXLNGYQ9BZA5 131 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 ZNF442Q9H7R0 627 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 PTGDR2Q9Y5Y4 395 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 BCL9O00512 1426 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 YJEFN3A6XGL0 299 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 GPR25O00155 361 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 TREHO43280 583 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 ZNF821O75541 412 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 NPPAP01160 153 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 HNRNPDQ14103 355 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 REEP3Q6NUK4 255 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 ENPP6Q6UWR7 440 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 ST7LQ8TDW4 575 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 PGAM5Q96HS1 289 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 PLCXD1Q9NUJ7 323 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 COQ4Q9Y3A0 265 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 PCDHGA2Q9Y5H1 932 aa10.58□□□□□ -0.72
GTF3C1-201ENST00000356183 A0A1W2PQL4 384 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 TTLL8A6PVC2 850 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 NPIPA2E9PIF3 369 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 NPIPA3F8WFD2 350 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 DIRAS3O95661 229 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 PRKCAP17252 672 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 NFATC3Q12968 1075 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 TMEM225Q6GV28 225 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 GPR20Q99678 358 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 HNRNPABQ99729 332 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 SMIM3Q9BZL3 60 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 WDR26Q9H7D7 661 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 KLHL9Q9P2J3 617 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 AFDNP55196 1824 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 E9PI62 339 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 UPK1BO75841 260 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 M6PRP20645 277 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 PBX2P40425 430 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 HLCSP50747 726 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 HSD11B2P80365 405 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 EMX2Q04743 252 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 LRIF1Q5T3J3 769 aa10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 WDR53Q7Z5U6 358 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-201ENST00000356183 SLC5A11Q8WWX8 675 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms