RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 LATO43561 262 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 IL1RNP18510 177 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 RBMXP38159 391 aaKnown RBP17.24■□□□□ 0.35
COL18A1-202ENST00000355480 NTHL1P78549 312 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 SHC2P98077 582 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 DLX2Q07687 328 aaPredicted RBP17.24■□□□□ 0.35
COL18A1-202ENST00000355480 TCEAL3Q969E4 200 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 KCNK13Q9HB14 408 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 HHATLQ9HCP6 504 aa17.24■□□□□ 0.35
COL18A1-202ENST00000355480 ALDOAP04075 364 aaKnown RBP17.23■□□□□ 0.35
COL18A1-202ENST00000355480 CTSAP10619 480 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 GCGRP47871 477 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 SLC36A3Q495N2 470 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 GTF2IRD2BQ6EKJ0 949 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 ARSKQ6UWY0 536 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 TSPAN33Q86UF1 283 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 GTF2IRD2Q86UP8 949 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 ZNF761Q86XN6 746 aaPredicted RBP17.23■□□□□ 0.35
COL18A1-202ENST00000355480 BOLLQ8N9W6 283 aaKnown RBP17.23■□□□□ 0.35
COL18A1-202ENST00000355480 HS6ST2Q96MM7 605 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 NEDD4LQ96PU5 975 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 BEX2Q9BXY8 128 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 BEX1Q9HBH7 125 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 GSTT2P0CG29 244 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 FOSL2P15408 326 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 PSMA6P60900 246 aaKnown RBP17.23■□□□□ 0.35
COL18A1-202ENST00000355480 FCAMRQ8WWV6 532 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 M0R129 80 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 PIK3C2AO00443 1686 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 AK1P00568 194 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 PLATP00750 562 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 SLC35E2BP0CK96 405 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 HMGCLP35914 325 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 ARL3P36405 182 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 SIM1P81133 766 aaPredicted RBP17.23■□□□□ 0.35
COL18A1-202ENST00000355480 ZC3H3Q8IXZ2 948 aaKnown RBP17.23■□□□□ 0.35
COL18A1-202ENST00000355480 ZNF709Q8N972 641 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 TOR1AIP2Q8NFQ8 470 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 FIBINQ8TAL6 211 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 MLXQ9UH92 298 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 CA3P07451 260 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 ACTC1P68032 377 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 ACTA1P68133 377 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 MALLQ13021 153 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 ALG10BQ5I7T1 473 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 PDSS2Q86YH6 399 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 DPH2Q9BQC3 489 aaPredicted RBP17.23■□□□□ 0.35
COL18A1-202ENST00000355480 CKMT1AP12532 417 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 MSX1P28360 303 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 HK3P52790 923 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 NIPAL4Q0D2K0 466 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 ATP6AP1Q15904 470 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 CDKL4Q5MAI5 379 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 SLC22A16Q86VW1 577 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 SPAG16Q8N0X2 631 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 GPR137CQ8N3F9 429 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 SAMD12Q8N8I0 201 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 ZNF675Q8TD23 568 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 ADAMTS18Q8TE60 1221 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 BORCS6Q96GS4 357 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 SECISBP2Q96T21 854 aaKnown RBP17.23■□□□□ 0.35
COL18A1-202ENST00000355480 STRA6Q9BX79 667 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 FBRSQ9HAH7 460 aa17.23■□□□□ 0.35
COL18A1-202ENST00000355480 SOX30O94993 753 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 GRPRP30550 384 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 ATG5Q9H1Y0 275 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 TMEM14AQ9Y6G1 99 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 HTRA2O43464 458 aaPredicted RBP17.22■□□□□ 0.35
COL18A1-202ENST00000355480 PCDHGA6Q9Y5G7 932 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 FMN2Q9NZ56 1722 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 A0A1W2PPK0 400 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 PCP4L1A6NKN8 68 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 M0R036 132 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 FDXRP22570 491 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 ELK4P28324 431 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 SCAPQ12770 1279 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 UNC5DQ6UXZ4 953 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 RELL1Q8IUW5 271 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 KLHDC8AQ8IYD2 350 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 CHST14Q8NCH0 376 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 DKK3Q9UBP4 350 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 MKLN1Q9UL63 735 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 hCG_1807616A0A1W2PRN6 198 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 CCRL2O00421 344 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 CD3GP09693 182 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 PGGT1BP53609 377 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 LPAL2Q16609 132 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 SFT2D3Q587I9 215 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 RADILQ96JH8 1075 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 KCNK12Q9HB15 430 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 AIG1Q9NVV5 245 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 ACOT7O00154 380 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 TIMP1P01033 207 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 SRYQ05066 204 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 MAB21L1Q13394 359 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 TCEAL1Q15170 157 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 FAM76BQ5HYJ3 339 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 LIPKQ5VXJ0 399 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 UNQ6126/PRO20091Q6UXV3 157 aa17.22■□□□□ 0.35
COL18A1-202ENST00000355480 ZNF440Q8IYI8 595 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms