RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 KCND3Q9UK17 655 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 PSME2Q9UL46 239 aa15.78■□□□□ 0.12
SAMM50-201ENST00000350028 MDC1Q14676 2089 aaKnown RBP15.77■□□□□ 0.12
SAMM50-201ENST00000350028 GLOD5A6NK44 160 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 IGLV3-19P01714 112 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 NR2F1P10589 423 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 EPHA2P29317 976 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 SLC35A2P78381 396 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 BTN3A2P78410 334 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 TFF2Q03403 129 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 PIGFQ07326 219 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 GNA13Q14344 377 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 PUM1Q14671 1186 aaKnown RBP eCLIP15.77■□□□□ 0.12
SAMM50-201ENST00000350028 TCEA2Q15560 299 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 TMEM31Q5JXX7 168 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 C18orf63Q68DL7 685 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 FBXO42Q6P3S6 717 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 KRT73Q86Y46 540 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 TRIM48Q8IWZ4 208 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 PHF10Q8WUB8 498 aaKnown RBP15.77■□□□□ 0.12
SAMM50-201ENST00000350028 XAGE5Q8WWM1 108 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 IPCEF1Q8WWN9 437 aaPredicted RBP15.77■□□□□ 0.12
SAMM50-201ENST00000350028 CNRIP1Q96F85 164 aaPredicted RBP15.77■□□□□ 0.12
SAMM50-201ENST00000350028 ZNF354BQ96LW1 612 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 CCDC90BQ9GZT6 254 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 SYNPO2LQ9H987 977 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 PCDHGA6Q9Y5G7 932 aa15.77■□□□□ 0.12
SAMM50-201ENST00000350028 SNRNP200O75643 2136 aaKnown RBP15.77■□□□□ 0.12
SAMM50-201ENST00000350028 SHISA7A6NL88 538 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 WASHC1A8K0Z3 465 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 FAM20BO75063 409 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 PRKRAO75569 313 aaKnown RBP15.77■□□□□ 0.11
SAMM50-201ENST00000350028 ATE1O95260 518 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 SLC35G6P0C7Q6 338 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 UGT2B7P16662 529 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 CD72P21854 359 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 PCMT1P22061 227 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 MPIP34949 423 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 CEBPEQ15744 281 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 NPTX1Q15818 432 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 COLEC12Q5KU26 742 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 KIAA0895LQ68EN5 471 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 GPR153Q6NV75 609 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 SZRD1Q7Z422 152 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 CCDC71Q8IV32 467 aaPredicted RBP15.77■□□□□ 0.11
SAMM50-201ENST00000350028 CCDC116Q8IYX3 515 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 BBS10Q8TAM1 723 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 SUN3Q8TAQ9 357 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 MIPOL1Q8TD10 442 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 GPBAR1Q8TDU6 330 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 TM4SF19Q96DZ7 209 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 ALPK1Q96QP1 1244 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 SH3GL3Q99963 347 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 SPATA5L1Q9BVQ7 753 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 BCL2L10Q9HD36 194 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 RLIMQ9NVW2 624 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 ACTR10Q9NZ32 417 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 ERVK-18Q9QC07 812 aa15.77■□□□□ 0.11
SAMM50-201ENST00000350028 GPC6Q9Y625 555 aaPredicted RBP15.77■□□□□ 0.11
SAMM50-201ENST00000350028 LRP4O75096 1905 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 FAM221BA6H8Z2 402 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 URADA6NGE7 173 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 ZNF99A8MXY4 864 aaPredicted RBP15.76■□□□□ 0.11
SAMM50-201ENST00000350028 PCDH17O14917 1159 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 EMC8O43402 210 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 NDUFS2O75306 463 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 VIPP01282 170 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 FHP07954 510 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 SMIM11AP58511 58 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 TEKQ02763 1124 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 RELAQ04206 551 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 SYPL1Q16563 259 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 LAIR1Q6GTX8 287 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 FIGLAQ6QHK4 219 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 TAGAPQ8N103 731 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 DEPDC4Q8N2C3 294 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 PARP8Q8N3A8 854 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 SVOPQ8N4V2 548 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 OR13H1Q8NG92 308 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 UTP15Q8TED0 518 aaKnown RBP15.76■□□□□ 0.11
SAMM50-201ENST00000350028 RAB2BQ8WUD1 216 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 GUCD1Q96NT3 240 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 COL21A1Q96P44 957 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 CDX2Q99626 313 aaPredicted RBP15.76■□□□□ 0.11
SAMM50-201ENST00000350028 MAPKAP1Q9BPZ7 522 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 TREX2Q9BQ50 279 aaPredicted RBP15.76■□□□□ 0.11
SAMM50-201ENST00000350028 GSDMCQ9BYG8 508 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 NAA50Q9GZZ1 169 aaKnown RBP15.76■□□□□ 0.11
SAMM50-201ENST00000350028 C6orf106Q9H6K1 298 aaPredicted RBP15.76■□□□□ 0.11
SAMM50-201ENST00000350028 C3orf14Q9HBI5 128 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 POT1Q9NUX5 634 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 SEC14L3Q9UDX4 400 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 ENTPD2Q9Y5L3 495 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 ZNF780BQ9Y6R6 833 aa15.76■□□□□ 0.11
SAMM50-201ENST00000350028 PRAMEF27A3QJZ7 478 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 OR5K4A6NMS3 321 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 H3BQ06 376 aaPredicted RBP15.75■□□□□ 0.11
SAMM50-201ENST00000350028 IGHV4-34P06331 123 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 ZNF888P0CJ79 500 aaPredicted RBP15.75■□□□□ 0.11
SAMM50-201ENST00000350028 SMIM10L1P0DMW3 83 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms