RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TMC5Q6UXY8 1006 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 UBE2J2Q8N2K1 259 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 EFHD2Q96C19 240 aaPredicted RBP17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 NUS1Q96E22 293 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 MTERF3Q96E29 417 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 YIPF2Q9BWQ6 316 aa17.15■□□□□ 0.34
PTP4A3-202ENST00000349124 PI15O43692 258 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 MPZL2O60487 215 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 APOA1P02647 267 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 SERPIND1P05546 499 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 ADH1AP07327 375 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 DEFA1P59665 94 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 DEFA3P59666 94 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 TIMM50Q3ZCQ8 353 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 KHDRBS2Q5VWX1 349 aaKnown RBP17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 PODNL1Q6PEZ8 512 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 CASP12Q6UXS9 341 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 ZFYVE19Q96K21 471 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 TREX2Q9BQ50 279 aaPredicted RBP17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 SEC14L3Q9UDX4 400 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 V9GYH0 126 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 NOTCH4Q99466 2003 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 TFECO14948 347 aaPredicted RBP17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 PDPK1O15530 556 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 SLITRK5O94991 958 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 PRKAG1P54619 331 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 SNRPGP62308 76 aaKnown RBP17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 DHCR24Q15392 516 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 AGAP6Q5VW22 663 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 ZER1Q7Z7L7 766 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 CACUL1Q86Y37 369 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 AGAP4Q96P64 663 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 A0A0C4DFX4 3053 aa17.14■□□□□ 0.33
PTP4A3-202ENST00000349124 LCMT2O60294 686 aaKnown RBP17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 CDRT1O95170 752 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 SNX4O95219 450 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 CISD3P0C7P0 127 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 ETV5P41161 510 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 SLC6A11P48066 632 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 KCNJ5P48544 419 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 CCT3P49368 545 aaKnown RBP17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 ETV1P50549 477 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 RHAGQ02094 409 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 ZNF750Q32MQ0 723 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 OR2G6Q5TZ20 316 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 C12orf73Q69YU5 71 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 PHC2Q8IXK0 858 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 NANOGP1Q8N7R0 232 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 OR5P2Q8WZ92 322 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 SMPDL3AQ92484 453 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 PIK3R3Q92569 461 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 TFGQ92734 400 aaPredicted RBP17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 DMRTB1Q96MA1 342 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 QRSL1Q9H0R6 528 aaKnown RBP17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 OR52A5Q9H2C5 316 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 A4GALTQ9NPC4 353 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 KLHL3Q9UH77 587 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 TBX21Q9UL17 535 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 MAFFQ9ULX9 164 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 A4GNTQ9UNA3 340 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 BOLA1Q9Y3E2 137 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 N6AMT1Q9Y5N5 214 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 TCF20Q9UGU0 1960 aaKnown RBP17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 PSMA1P25786 263 aaKnown RBP17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 HTR3AP46098 478 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 DAB2P98082 770 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 NRSN1Q8IZ57 195 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 OR9Q1Q8NGQ5 310 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 MMP28Q9H239 520 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 EPHX3Q9H6B9 360 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 TRPC4Q9UBN4 977 aa17.13■□□□□ 0.33
PTP4A3-202ENST00000349124 PIPP12273 146 aaPredicted RBP17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 MMP11P24347 488 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 PCBP4P57723 403 aaKnown RBP17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 C22orf42Q6IC83 251 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 TMPRSS11AQ6ZMR5 421 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 SHFQ7M4L6 423 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 OR6F1Q8NGZ6 308 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 OR2L2Q8NH16 312 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 ZNF354BQ96LW1 612 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 LGR4Q9BXB1 951 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 ABCB9Q9NP78 766 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 MGAT4BQ9UQ53 548 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 GPR52Q9Y2T5 361 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 WBP11Q9Y2W2 641 aaKnown RBP17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 A0A075B6Q4 140 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 A0A1W2PS29 197 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 ARRDC5A6NEK1 342 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 CAPN5O15484 640 aaPredicted RBP17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 SEMA3DO95025 777 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 EPPINO95925 133 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 SSTR4P31391 388 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 CAV3P56539 151 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 GINS1Q14691 196 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 HEPACAMQ14CZ8 416 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 NCF4Q15080 339 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 USP30Q70CQ3 517 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 IKBIPQ70UQ0 350 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 GRASPQ7Z6J2 395 aaPredicted RBP17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 UBE3DQ7Z6J8 389 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms