RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 FAR1Q8WVX9 515 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 UHRF1Q96T88 793 aaPredicted RBP18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 INSM2Q96T92 566 aaPredicted RBP18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 ZBTB20Q9HC78 741 aaPredicted RBP18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 TRPV5Q9NQA5 729 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 TMEM30AQ9NV96 361 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 SRPK3Q9UPE1 567 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 MYO18AQ92614 2054 aaKnown RBP18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 GPR143P51810 404 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 CES4AQ5XG92 561 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 RFLNAQ6ZTI6 216 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 HDDC2Q7Z4H3 204 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 PLPP6Q8IY26 295 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 OR5K2Q8NHB8 316 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 UBE2ZQ9H832 354 aaPredicted RBP18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 KCNK12Q9HB15 430 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 GON4LQ3T8J9 2241 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 PPM1BO75688 479 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 CD36P16671 472 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 DDCP20711 480 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 PBX2P40425 430 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 MAP3K8P41279 467 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 UBE2J2Q8N2K1 259 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 POLDIP3Q9BY77 421 aaKnown RBP18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 ALOXE3Q9BYJ1 711 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 BRD7Q9NPI1 651 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 A6NCN8 305 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 SEMA3DO95025 777 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 PTNP21246 168 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 CBLP22681 906 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 OTX2P32243 289 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 MAGEA3P43357 314 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 COL9A2Q14055 689 aaPredicted RBP18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 TMEM52BQ4KMG9 183 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 TMEM225Q6GV28 225 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 OGFOD2Q6N063 350 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 COQ8BQ96D53 544 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 TMEM19Q96HH6 336 aa18.65■□□□□ 0.58
SEMA6C-201ENST00000341697 DPPA5A6NC42 116 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 AHCYL1O43865 530 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 PLOD3O60568 738 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 WSCD2Q2TBF2 565 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 TMEM31Q5JXX7 168 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 CHERPQ8IWX8 916 aaKnown RBP18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 TCEANCQ8N8B7 351 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 YIPF7Q8N8F6 280 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 ACOT4Q8N9L9 421 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 HS6ST2Q96MM7 605 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 A0A0G2JPF8 293 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 WASHC1A8K0Z3 465 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 HNRNPCL3B7ZW38 293 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 HNRNPCL4P0DMR1 293 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 RHCEP18577 417 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 PDX1P52945 283 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 INHBCP55103 352 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 PER3P56645 1201 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 RNASE12Q5GAN4 147 aaKnown RBP18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 WASH2PQ6VEQ5 465 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 USP43Q70EL4 1123 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 HMGN2P46Q86SG4 172 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 TMEM151BQ8IW70 566 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 PRR11Q96HE9 360 aaPredicted RBP18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 PDCD10Q9BUL8 212 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 MND1Q9BWT6 205 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 MKLN1Q9UL63 735 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 ITGA10O75578 1167 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 EDNRAP25101 427 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 GCAP28676 217 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 FAM69BQ5VUD6 431 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 SATL1Q86VE3 508 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 GOLM1Q8NBJ4 401 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 A0A0A6YYC8 382 aaPredicted RBP18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 I3L1I5 382 aaPredicted RBP18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 HSD17B1P14061 328 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 SDC1P18827 310 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 PGFP49763 221 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 EIF2B2P49770 351 aaKnown RBP18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 GINS1Q14691 196 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 SLC35F1Q5T1Q4 408 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 SLC25A24Q6NUK1 477 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 ACPTQ9BZG2 426 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 TRIM36Q9NQ86 728 aa18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 PTBP2Q9UKA9 531 aaKnown RBP18.64■□□□□ 0.57
SEMA6C-201ENST00000341697 RDH16O75452 317 aa18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 SYNGR4O95473 234 aa18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 IGLV3-25P01717 112 aa18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 CAPN3P20807 821 aa18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 ZSWIM9Q86XI8 627 aa18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 THEM6Q8WUY1 208 aa18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 MTHFD2LQ9H903 347 aaPredicted RBP18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 BTNL2Q9UIR0 455 aa18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 NME7Q9Y5B8 376 aa18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 AQP9O43315 295 aa18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 ITGA3P26006 1051 aa18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 RNF144AP50876 292 aaPredicted RBP18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 PRDX1Q06830 199 aaKnown RBP18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 EXOC3L2Q2M3D2 409 aa18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 LARP4Q71RC2 724 aaKnown RBP eCLIP18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 HOXD1Q9GZZ0 328 aa18.63■□□□□ 0.57
SEMA6C-201ENST00000341697 SNTG1Q9NSN8 517 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms