RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 PIWIL2Q8TC59 973 aaKnown RBP12.32□□□□□ -0.44
TUBD1-202ENST00000340993 RIT1Q92963 219 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 ZNF552Q9H707 407 aaPredicted RBP12.32□□□□□ -0.44
TUBD1-202ENST00000340993 MEAF6Q9HAF1 191 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 MYNNQ9NPC7 610 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 HAO1Q9UJM8 370 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 CES1P1Q9UKY3 287 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 EXO1Q9UQ84 846 aaKnown RBP12.32□□□□□ -0.44
TUBD1-202ENST00000340993 ENTPD4Q9Y227 616 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 USH1CQ9Y6N9 552 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 ZNF780BQ9Y6R6 833 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 CPAMD8Q8IZJ3 1885 aa12.32□□□□□ -0.44
TUBD1-202ENST00000340993 KLF11O14901 512 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 PORP16435 677 aaPredicted RBP12.31□□□□□ -0.44
TUBD1-202ENST00000340993 DDCP20711 480 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 PRPH2P23942 346 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 NCBP2P52298 156 aaKnown RBP eCLIP12.31□□□□□ -0.44
TUBD1-202ENST00000340993 TRA2BP62995 288 aaKnown RBP12.31□□□□□ -0.44
TUBD1-202ENST00000340993 MYBPC3Q14896 1274 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 EXOSC7Q15024 291 aaKnown RBP12.31□□□□□ -0.44
TUBD1-202ENST00000340993 NNATQ16517 81 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 ZNF385BQ569K4 471 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 AGAP7PQ5VUJ5 663 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 PLAG1Q6DJT9 500 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 ASB18Q6ZVZ8 466 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 B3GNT7Q8NFL0 401 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 OR7A2PQ8NGA2 310 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 AGAP4Q96P64 663 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 OR52B2Q96RD2 323 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 BBS4Q96RK4 519 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 GAL3ST4Q96RP7 486 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 EBF4Q9BQW3 602 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 CDCP1Q9H5V8 836 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 NPHS2Q9NP85 383 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 DCTN4Q9UJW0 460 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 ZNF223Q9UK11 482 aaPredicted RBP12.31□□□□□ -0.44
TUBD1-202ENST00000340993 EIF3LQ9Y262 564 aaKnown RBP12.31□□□□□ -0.44
TUBD1-202ENST00000340993 EML6Q6ZMW3 1958 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 CFAP46Q8IYW2 2715 aa12.31□□□□□ -0.44
TUBD1-202ENST00000340993 E9PBE3 544 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 ATP8B1O43520 1251 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 KLHL41O60662 606 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 DDAH2O95865 285 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 VIMP08670 466 aaKnown RBP12.3□□□□□ -0.44
TUBD1-202ENST00000340993 AQP5P55064 265 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 HSPB3Q12988 150 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 EXT1Q16394 746 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 LACTB2Q53H82 288 aaPredicted RBP12.3□□□□□ -0.44
TUBD1-202ENST00000340993 SZRD1Q7Z422 152 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 GALNT12Q8IXK2 581 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 ST13P4Q8IZP2 240 aaPredicted RBP12.3□□□□□ -0.44
TUBD1-202ENST00000340993 NFAM1Q8NET5 270 aaPredicted RBP12.3□□□□□ -0.44
TUBD1-202ENST00000340993 SLC39A7Q92504 469 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 DAZLQ92904 295 aaKnown RBP12.3□□□□□ -0.44
TUBD1-202ENST00000340993 NACC2Q96BF6 587 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 SENP5Q96HI0 755 aaPredicted RBP12.3□□□□□ -0.44
TUBD1-202ENST00000340993 C7orf26Q96N11 449 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 UBL7Q96S82 380 aaPredicted RBP12.3□□□□□ -0.44
TUBD1-202ENST00000340993 CCT7Q99832 543 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 DEFB126Q9BYW3 111 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 SVILO95425 2214 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 BLACEA4D250 179 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 TRPC5OSA6NMA1 111 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 WWP2O00308 870 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 ALDOCP09972 364 aaKnown RBP12.3□□□□□ -0.44
TUBD1-202ENST00000340993 PCSK2P16519 638 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 LBPP18428 481 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 MAPK1P28482 360 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 CLCN2P51788 898 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 SRSF11Q05519 484 aaKnown RBP12.3□□□□□ -0.44
TUBD1-202ENST00000340993 PGS1Q32NB8 556 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 C6orf163Q5TEZ5 329 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 TCTN3Q6NUS6 607 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 RNF165Q6ZSG1 346 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 ZNF551Q7Z340 670 aaPredicted RBP12.3□□□□□ -0.44
TUBD1-202ENST00000340993 BEST3Q8N1M1 668 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 LRRC25Q8N386 305 aaPredicted RBP12.3□□□□□ -0.44
TUBD1-202ENST00000340993 ARFGAP2Q8N6H7 521 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 APCDD1LQ8NCL9 501 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 OR14A16Q8NHC5 309 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 RFWD2Q8NHY2 731 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 M1APQ8TC57 530 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 PSMF1Q92530 271 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 PPCDCQ96CD2 204 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 NPAS2Q99743 824 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 SLAMF7Q9NQ25 335 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 SLC35C2Q9NQQ7 365 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 GIMAP4Q9NUV9 329 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 FGFR1OP2Q9NVK5 253 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 COPS7AQ9UBW8 275 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 BCAP29Q9UHQ4 241 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 PSME2Q9UL46 239 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 TMED5Q9Y3A6 229 aa12.3□□□□□ -0.44
TUBD1-202ENST00000340993 ZNF195O14628 629 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 DYRK3O43781 588 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 SNUPNO95149 360 aaKnown RBP12.29□□□□□ -0.44
TUBD1-202ENST00000340993 CYC1P08574 325 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 SLC35E2P0CK97 266 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 DRD2P14416 443 aa12.29□□□□□ -0.44
TUBD1-202ENST00000340993 HPCAL1P37235 193 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms