RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 IFNGR1P15260 489 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 M6PRP20645 277 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 CFL1P23528 166 aaKnown RBP9.41□□□□□ -0.9
COL4A6-201ENST00000334504 USP50Q70EL3 339 aaPredicted RBP9.41□□□□□ -0.9
COL4A6-201ENST00000334504 LYSMD3Q7Z3D4 306 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 HMGN2P46Q86SG4 172 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 C7orf43Q8WVR3 580 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 HAS2Q92819 552 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 ATG4BQ9Y4P1 393 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 PTGDR2Q9Y5Y4 395 aa9.41□□□□□ -0.9
COL4A6-201ENST00000334504 C11orf98E9PRG8 122 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 GNB3P16520 340 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 RNF4P78317 190 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 ITPRIPL2Q3MIP1 535 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 SYPL2Q5VXT5 272 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 IFNL1Q8IU54 200 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 LILRB2Q8N423 598 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 C2CD4AQ8NCU7 369 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 OR8J1Q8NGP2 316 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 BBS10Q8TAM1 723 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 NRG4Q8WWG1 115 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 RRNAD1Q96FB5 475 aaKnown RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 FAM163AQ96GL9 167 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 MAGIXQ9H6Y5 334 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 TAS2R8Q9NYW2 309 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 NCDNQ9UBB6 729 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 COL1A2P08123 1366 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 MYBPHLA2RUH7 354 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 PLGP00747 810 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 ATP1B2P14415 290 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 MAT2AP31153 395 aaKnown RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 ELOAQ14241 798 aaKnown RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 C6orf136Q5SQH8 315 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 PAPD5Q8NDF8 572 aaKnown RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 CMASQ8NFW8 434 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 NPLOC4Q8TAT6 608 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 ST7LQ8TDW4 575 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 UPF1Q92900 1129 aaKnown RBP eCLIP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 MOCOSQ96EN8 888 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 URM1Q9BTM9 101 aaKnown RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 TGIF2Q9GZN2 237 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 TXNL4BQ9NX01 149 aaKnown RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 ERVW-1Q9UQF0 538 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 LRRIQ1Q96JM4 1722 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 TTLL8A6PVC2 850 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 SOX1O00570 391 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 ARPC1BO15143 372 aaKnown RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 SORBS2O94875 1100 aaKnown RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 EPOP01588 193 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 TPT1P13693 172 aaKnown RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 DPP6P42658 865 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 HCAR3P49019 387 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 CDK3Q00526 305 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 SLC25A11Q02978 314 aaKnown RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 PTCHD3Q3KNS1 767 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 SMYD5Q6GMV2 418 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 ZNF705AQ6ZN79 300 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 VGLL2Q8N8G2 317 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 SYT14Q8NB59 555 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 OR4D6Q8NGJ1 314 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 OR1J4Q8NGS1 313 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 PROKR1Q8TCW9 393 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 HCAR2Q8TDS4 363 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 SNX27Q96L92 541 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 ACBD6Q9BR61 282 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 REEP4Q9H6H4 257 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 RETREG1Q9H6L5 497 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 Q9N2J8 555 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 IL37Q9NZH6 218 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 PLAGL1Q9UM63 463 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 CARNS1A5YM72 827 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 TREHO43280 583 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 PRICKLE3O43900 615 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 FGF19O95750 216 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 DCNP07585 359 aaKnown RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 ADRB3P13945 408 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 UGT2B7P16662 529 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 AK4P27144 223 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 SERPINF1P36955 418 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 ACTA2P62736 377 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 ACTG2P63267 376 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 PDGFRLQ15198 375 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 SLC29A4Q7RTT9 530 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 PLA2G15Q8NCC3 412 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 OR5M3Q8NGP4 307 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 OR6N1Q8NGY5 312 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 OR4Q3Q8NH05 313 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 HAPLN3Q96S86 360 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 CMKLR1Q99788 373 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 ANKRD60Q9BZ19 345 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 NSUN3Q9H649 340 aaKnown RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 PCDHGA7Q9Y5G6 932 aa9.4□□□□□ -0.9
COL4A6-201ENST00000334504 CFAP20Q9Y6A4 193 aaKnown RBP9.4□□□□□ -0.9
COL4A6-201ENST00000334504 TMEM88BA6NKF7 163 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 OR7A17O14581 309 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 WNT9AO14904 365 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 LILRB5O75023 590 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 RHBDL3P58872 404 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 DBPQ10586 325 aaPredicted RBP9.4□□□□□ -0.91
COL4A6-201ENST00000334504 PEA15Q15121 130 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms