RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 SCHIP1Q9P0W5 487 aaPredicted RBP17.93■□□□□ 0.46
RFTN1-201ENST00000334133 MDC1Q14676 2089 aaKnown RBP17.93■□□□□ 0.46
RFTN1-201ENST00000334133 LRIT2A6NDA9 550 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 HAT1O14929 419 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 SEMA3DO95025 777 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 ZNF12P17014 697 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 CRISP1P54107 249 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 KCNC4Q03721 635 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 TRIM16LQ309B1 348 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 ARMCX4Q5H9R4 360 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 COLEC12Q5KU26 742 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 C18orf63Q68DL7 685 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 RNF217Q8TC41 542 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 ZBED6CLQ96FA7 236 aaPredicted RBP17.92■□□□□ 0.46
RFTN1-201ENST00000334133 SFXN1Q9H9B4 322 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 ATG4BQ9Y4P1 393 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 A0A0C4DFX4 3053 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 FUOMA2VDF0 154 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 NTN1O95631 604 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 TNNI3P19429 210 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 SNRPNP63162 240 aaKnown RBP17.92■□□□□ 0.46
RFTN1-201ENST00000334133 CD300CQ08708 224 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 SLAMF1Q13291 335 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 LASP1Q14847 261 aaKnown RBP17.92■□□□□ 0.46
RFTN1-201ENST00000334133 TMEM31Q5JXX7 168 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 OR6Q1Q8NGQ2 317 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 MCFD2Q8NI22 146 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 DOK4Q8TEW6 326 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 CREB3L4Q8TEY5 395 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 APOBEC4Q8WW27 367 aaKnown RBP17.92■□□□□ 0.46
RFTN1-201ENST00000334133 C16orf58Q96GQ5 468 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 CENPOQ9BU64 300 aa17.92■□□□□ 0.46
RFTN1-201ENST00000334133 TRNAU1APQ9NX07 287 aaKnown RBP17.92■□□□□ 0.46
RFTN1-201ENST00000334133 YBX2Q9Y2T7 364 aaKnown RBP17.92■□□□□ 0.46
RFTN1-201ENST00000334133 CEACAM5P06731 702 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 CDC42P60953 191 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 DEPDC4Q8N2C3 294 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 MFSD4AQ8N468 514 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 CHPT1Q8WUD6 406 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 BBS4Q96RK4 519 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 CD93Q9NPY3 652 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 TMCC3Q9ULS5 477 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 KCNE3Q9Y6H6 103 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 FRS3O43559 492 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 CKMT1AP12532 417 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 RAB28P51157 221 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 CLDN2P57739 230 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 ZNF770Q6IQ21 691 aaPredicted RBP17.91■□□□□ 0.46
RFTN1-201ENST00000334133 PSMA8Q8TAA3 256 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 Q96MT0 163 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 AMDHD1Q96NU7 426 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 MYADMQ96S97 322 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 RSPH9Q9H1X1 276 aaPredicted RBP17.91■□□□□ 0.46
RFTN1-201ENST00000334133 NEUROD4Q9HD90 331 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 SLC6A20Q9NP91 592 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 MRPS30Q9NP92 439 aaKnown RBP17.91■□□□□ 0.46
RFTN1-201ENST00000334133 PHPT1Q9NRX4 125 aaPredicted RBP17.91■□□□□ 0.46
RFTN1-201ENST00000334133 FTSJ1Q9UET6 329 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 COL4A3Q01955 1670 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 TBC1D3DA0A087WVF3 549 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 TBC1D3IA0A087WXS9 549 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 TBC1D3EA0A087X179 549 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 TBC1D3KA0A087X1G2 549 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 TBC1D3FA6NER0 549 aaPredicted RBP17.91■□□□□ 0.46
RFTN1-201ENST00000334133 TBC1D3LB9A6J9 549 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 ENTPD6O75354 484 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 EML2O95834 649 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 DNTTP04053 509 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 TBC1D3HP0C7X1 549 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 MAGP20916 626 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 PTNP21246 168 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 ELAVL4P26378 380 aaKnown RBP17.91■□□□□ 0.46
RFTN1-201ENST00000334133 CERS1P27544 350 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 HMGA2P52926 109 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 TARDBPQ13148 414 aaKnown RBP eCLIP17.91■□□□□ 0.46
RFTN1-201ENST00000334133 DUSP6Q16828 381 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 TBC1D3GQ6DHY5 549 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 TBC1D3CQ6IPX1 549 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 TBC1D3Q8IZP1 549 aaPredicted RBP17.91■□□□□ 0.46
RFTN1-201ENST00000334133 SLC7A13Q8TCU3 470 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 SLC35G5Q96KT7 338 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 PBX4Q9BYU1 374 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 A4GALTQ9NPC4 353 aa17.91■□□□□ 0.46
RFTN1-201ENST00000334133 APODP05090 189 aa17.9■□□□□ 0.46
RFTN1-201ENST00000334133 SERPINB10P48595 397 aa17.9■□□□□ 0.46
RFTN1-201ENST00000334133 TBCEQ15813 527 aaPredicted RBP17.9■□□□□ 0.46
RFTN1-201ENST00000334133 DCST1Q5T197 706 aa17.9■□□□□ 0.46
RFTN1-201ENST00000334133 TMEM107Q6UX40 140 aa17.9■□□□□ 0.46
RFTN1-201ENST00000334133 SLC35C2Q9NQQ7 365 aa17.9■□□□□ 0.46
RFTN1-201ENST00000334133 TSC22D4Q9Y3Q8 395 aa17.9■□□□□ 0.46
RFTN1-201ENST00000334133 AP1M2Q9Y6Q5 423 aa17.9■□□□□ 0.46
RFTN1-201ENST00000334133 A0A1W2PR48 441 aa17.9■□□□□ 0.46
RFTN1-201ENST00000334133 H0Y8X5 98 aa17.9■□□□□ 0.46
RFTN1-201ENST00000334133 AK4P27144 223 aaPredicted RBP17.9■□□□□ 0.46
RFTN1-201ENST00000334133 TRIM23P36406 574 aa17.9■□□□□ 0.46
RFTN1-201ENST00000334133 DENND6BQ8NEG7 585 aa17.9■□□□□ 0.46
RFTN1-201ENST00000334133 WDR36Q8NI36 951 aaKnown RBP17.9■□□□□ 0.46
RFTN1-201ENST00000334133 QRFPRQ96P65 431 aa17.9■□□□□ 0.46
RFTN1-201ENST00000334133 MIR1-1HGQ9H1L0 117 aa17.9■□□□□ 0.46
RFTN1-201ENST00000334133 PLCXD1Q9NUJ7 323 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms