RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 OTUB1Q96FW1 271 aaPredicted RBP14.33□□□□□ -0.12
PRPF3-201ENST00000324862 PTCHD1Q96NR3 888 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 ANKRD27Q96NW4 1050 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 MKL2Q9ULH7 1088 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 MAPRE3Q9UPY8 281 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 PRORSD1PA6NEY8 169 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 HRKO00198 91 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 DNAJC8O75937 253 aaPredicted RBP14.33□□□□□ -0.12
PRPF3-201ENST00000324862 TNFSF15O95150 251 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 CT62P0C5K7 136 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 CSNK2A2P19784 350 aaPredicted RBP14.33□□□□□ -0.12
PRPF3-201ENST00000324862 NTSP30990 170 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 PGM1P36871 562 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 MC3RP41968 323 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 CEBPEQ15744 281 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 FAM111BQ6SJ93 734 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 CEACAM20Q6UY09 585 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 IFNEQ86WN2 208 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 TANKQ92844 425 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 MR1Q95460 341 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 TMEM125Q96AQ2 219 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 ALOXE3Q9BYJ1 711 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 GPATCH2Q9NW75 528 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 GID8Q9NWU2 228 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 IFT80Q9P2H3 777 aaPredicted RBP14.33□□□□□ -0.12
PRPF3-201ENST00000324862 PSME2Q9UL46 239 aa14.33□□□□□ -0.12
PRPF3-201ENST00000324862 GPC1P35052 558 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 STX4Q12846 297 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 TRMT12Q53H54 448 aaKnown RBP14.32□□□□□ -0.12
PRPF3-201ENST00000324862 RUNDC3AQ59EK9 446 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 NIPAL1Q6NVV3 410 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 C16orf89Q6UX73 402 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 ANGPTL8Q6UXH0 198 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 HACD2Q6Y1H2 254 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 WDR53Q7Z5U6 358 aaPredicted RBP14.32□□□□□ -0.12
PRPF3-201ENST00000324862 BPHLQ86WA6 291 aaPredicted RBP14.32□□□□□ -0.12
PRPF3-201ENST00000324862 LRRC25Q8N386 305 aaPredicted RBP14.32□□□□□ -0.12
PRPF3-201ENST00000324862 WDR36Q8NI36 951 aaKnown RBP14.32□□□□□ -0.12
PRPF3-201ENST00000324862 ZNF764Q96H86 408 aaPredicted RBP14.32□□□□□ -0.12
PRPF3-201ENST00000324862 TAAR9Q96RI9 348 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 SLC35A5Q9BS91 424 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 THUMPD3Q9BV44 507 aaKnown RBP14.32□□□□□ -0.12
PRPF3-201ENST00000324862 VN1R1Q9GZP7 353 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 ZNF282Q9UDV7 671 aaPredicted RBP14.32□□□□□ -0.12
PRPF3-201ENST00000324862 PCDHGB4Q9UN71 923 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 LOC400499M0QZD8 3231 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 AHCTF1Q8WYP5 2266 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 A8MUA0 341 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 HNRNPCL1O60812 293 aaKnown RBP14.32□□□□□ -0.12
PRPF3-201ENST00000324862 CTNSO60931 367 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 ERN1O75460 977 aaKnown RBP14.32□□□□□ -0.12
PRPF3-201ENST00000324862 ZGLP1P0C6A0 271 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 PCSK2P16519 638 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 PRKAG1P54619 331 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 COX20Q5RI15 118 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 BNC2Q6ZN30 1099 aaPredicted RBP14.32□□□□□ -0.12
PRPF3-201ENST00000324862 MSANTD1Q6ZTZ1 278 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 LANCL3Q6ZV70 420 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 ZNF595Q8IYB9 648 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 OR5P2Q8WZ92 322 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 MCUR1Q96AQ8 359 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 TPT1P8Q9HAU6 139 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 SPAG4Q9NPE6 437 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 TMEM181Q9P2C4 612 aa14.32□□□□□ -0.12
PRPF3-201ENST00000324862 TMX2-CTNND1H3BSU7 103 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 RECKO95980 971 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 PORP16435 677 aaPredicted RBP14.31□□□□□ -0.12
PRPF3-201ENST00000324862 NT5EP21589 574 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 MPIP34949 423 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 NKG7Q16617 165 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 DNAL1Q4LDG9 190 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 SCUBE1Q8IWY4 988 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 ULK2Q8IYT8 1036 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 OR7G2Q8NG99 324 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 FBXO30Q8TB52 745 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 ZFP90Q8TF47 636 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 FAM120BQ96EK7 910 aaKnown RBP14.31□□□□□ -0.12
PRPF3-201ENST00000324862 ACSS1Q9NUB1 689 aaPredicted RBP14.31□□□□□ -0.12
PRPF3-201ENST00000324862 GIMAP4Q9NUV9 329 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 MRPS33Q9Y291 106 aaKnown RBP14.31□□□□□ -0.12
PRPF3-201ENST00000324862 IGHV3-20A0A0C4DH32 117 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 A8MUI8 341 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 CLIC1O00299 241 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 CLDN4O14493 209 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 NUDT7P0C024 238 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 TRPC1P48995 793 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 RAB15P59190 212 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 RHAGQ02094 409 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.31□□□□□ -0.12
PRPF3-201ENST00000324862 TMPRSS12Q86WS5 348 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 OR10A6Q8NH74 314 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 GOT1L1Q8NHS2 421 aaPredicted RBP14.31□□□□□ -0.12
PRPF3-201ENST00000324862 SPSB2Q99619 263 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 HOPXQ9BPY8 73 aaPredicted RBP14.31□□□□□ -0.12
PRPF3-201ENST00000324862 DPH2Q9BQC3 489 aaPredicted RBP14.31□□□□□ -0.12
PRPF3-201ENST00000324862 CPPED1Q9BRF8 314 aaPredicted RBP14.31□□□□□ -0.12
PRPF3-201ENST00000324862 YIPF4Q9BSR8 244 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 PCDHAC1Q9H158 963 aa14.31□□□□□ -0.12
PRPF3-201ENST00000324862 MKKSQ9NPJ1 570 aaPredicted RBP14.31□□□□□ -0.12
PRPF3-201ENST00000324862 VPS4AQ9UN37 437 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms