RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 FAM118AQ9NWS6 357 aa20.15■□□□□ 0.82
RNF40-201ENST00000324685 RING1Q06587 406 aa20.15■□□□□ 0.82
RNF40-201ENST00000324685 NPRL3Q12980 569 aa20.15■□□□□ 0.82
RNF40-201ENST00000324685 COQ5Q5HYK3 327 aa20.15■□□□□ 0.82
RNF40-201ENST00000324685 Q6ZVL8 140 aa20.15■□□□□ 0.82
RNF40-201ENST00000324685 TRUB1Q8WWH5 349 aaKnown RBP20.15■□□□□ 0.82
RNF40-201ENST00000324685 FAM46BQ96A09 425 aa20.15■□□□□ 0.82
RNF40-201ENST00000324685 POLE4Q9NR33 117 aa20.15■□□□□ 0.82
RNF40-201ENST00000324685 ATPIF1Q9UII2 106 aa20.15■□□□□ 0.82
RNF40-201ENST00000324685 KLHL33A6NCF5 533 aa20.14■□□□□ 0.82
RNF40-201ENST00000324685 PLD2O14939 933 aa20.14■□□□□ 0.82
RNF40-201ENST00000324685 TSPAN6O43657 245 aa20.14■□□□□ 0.82
RNF40-201ENST00000324685 LEFTY1O75610 366 aa20.14■□□□□ 0.82
RNF40-201ENST00000324685 BEST1O76090 585 aa20.14■□□□□ 0.82
RNF40-201ENST00000324685 PTNP21246 168 aa20.14■□□□□ 0.82
RNF40-201ENST00000324685 NCCRP1Q6ZVX7 275 aaPredicted RBP20.14■□□□□ 0.82
RNF40-201ENST00000324685 IRF7Q92985 503 aa20.14■□□□□ 0.82
RNF40-201ENST00000324685 LGALS12Q96DT0 336 aa20.14■□□□□ 0.82
RNF40-201ENST00000324685 NSUN5Q96P11 429 aaKnown RBP20.14■□□□□ 0.82
RNF40-201ENST00000324685 HLA-EP13747 358 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 PRKCAP17252 672 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 AK4P27144 223 aaPredicted RBP20.14■□□□□ 0.81
RNF40-201ENST00000324685 ADH6P28332 368 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 GCGRP47871 477 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 MOGSQ13724 837 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 SGCAQ16586 387 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 AADACL4Q5VUY2 407 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 SLC22A8Q8TCC7 542 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 GATAD2BQ8WXI9 593 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 ADAMTS6Q9UKP5 1117 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 UCHL1P09936 223 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 HOXB9P17482 250 aaPredicted RBP20.14■□□□□ 0.81
RNF40-201ENST00000324685 SLAMF1Q13291 335 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 LRIT3Q3SXY7 679 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 ARSJQ5FYB0 599 aaPredicted RBP20.14■□□□□ 0.81
RNF40-201ENST00000324685 PLEKHO2Q8TD55 490 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 KLHL15Q96M94 604 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 FN3KQ9H479 309 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 ABCC6O95255 1503 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 PFKMP08237 780 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 NAA10P41227 235 aaPredicted RBP20.14■□□□□ 0.81
RNF40-201ENST00000324685 SPHARQ15513 63 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 UMODL1-AS1Q8N2C9 162 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 RAD9AQ99638 391 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 ZNF559Q9BR84 538 aa20.14■□□□□ 0.81
RNF40-201ENST00000324685 DNMT3AQ9Y6K1 912 aaPredicted RBP20.14■□□□□ 0.81
RNF40-201ENST00000324685 DENRO43583 198 aaKnown RBP20.13■□□□□ 0.81
RNF40-201ENST00000324685 ETV3P41162 512 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 CCDC58Q4VC31 144 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 FAM182AQ5T1J6 154 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 KANK2Q63ZY3 851 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 LRP10Q7Z4F1 713 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 TREX2Q9BQ50 279 aaPredicted RBP20.13■□□□□ 0.81
RNF40-201ENST00000324685 STRA6Q9BX79 667 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 E7ESA3 106 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 NDUFV2P19404 249 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 RIDAP52758 137 aaKnown RBP20.13■□□□□ 0.81
RNF40-201ENST00000324685 RPS15AP62244 130 aaKnown RBP20.13■□□□□ 0.81
RNF40-201ENST00000324685 PLCXD2Q0VAA5 305 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 BLOC1S3Q6QNY0 202 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 PM20D2Q8IYS1 436 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 PGAM5Q96HS1 289 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 TRBV2A0A0J9YWF9 115 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 OR5K4A6NMS3 321 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 SCAMP2O15127 329 aaKnown RBP20.13■□□□□ 0.81
RNF40-201ENST00000324685 S1PR4O95977 384 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 ALDOAP04075 364 aaKnown RBP20.13■□□□□ 0.81
RNF40-201ENST00000324685 PGCP20142 388 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 PER3P56645 1201 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 GSCP56915 257 aaPredicted RBP20.13■□□□□ 0.81
RNF40-201ENST00000324685 BRI3BPQ8WY22 251 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 C7orf34Q96L11 122 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 FOLH1BQ9HBA9 442 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 UNCXA6NJT0 531 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 COCHO43405 550 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 CREBL2O60519 120 aaPredicted RBP20.13■□□□□ 0.81
RNF40-201ENST00000324685 TMEM35AQ53FP2 167 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 MSANTD3Q96H12 275 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 PPP4R1LQ9P1A2 415 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 CD8B2A6NJW9 211 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 FGF18O76093 207 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 CD8BP10966 210 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 PIGFQ07326 219 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 EIF5A2Q9GZV4 153 aaKnown RBP20.13■□□□□ 0.81
RNF40-201ENST00000324685 COPZ2Q9P299 210 aa20.13■□□□□ 0.81
RNF40-201ENST00000324685 GXYLT2A0PJZ3 443 aa20.12■□□□□ 0.81
RNF40-201ENST00000324685 SLC26A5P58743 744 aa20.12■□□□□ 0.81
RNF40-201ENST00000324685 RNF111Q6ZNA4 994 aa20.12■□□□□ 0.81
RNF40-201ENST00000324685 ZNF611Q8N823 705 aa20.12■□□□□ 0.81
RNF40-201ENST00000324685 PTCHD1Q96NR3 888 aa20.12■□□□□ 0.81
RNF40-201ENST00000324685 GPRC5BQ9NZH0 403 aa20.12■□□□□ 0.81
RNF40-201ENST00000324685 EMC3Q9P0I2 261 aa20.12■□□□□ 0.81
RNF40-201ENST00000324685 CAMTA1Q9Y6Y1 1673 aa20.12■□□□□ 0.81
RNF40-201ENST00000324685 AXIN1O15169 862 aa20.12■□□□□ 0.81
RNF40-201ENST00000324685 DIRAS3O95661 229 aa20.12■□□□□ 0.81
RNF40-201ENST00000324685 FBLP22087 321 aaKnown RBP20.12■□□□□ 0.81
RNF40-201ENST00000324685 GKP32189 559 aa20.12■□□□□ 0.81
RNF40-201ENST00000324685 BEST3Q8N1M1 668 aa20.12■□□□□ 0.81
RNF40-201ENST00000324685 SYNPOQ8N3V7 929 aa20.12■□□□□ 0.81
RNF40-201ENST00000324685 METTL25Q8N6Q8 603 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms