RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 PLA2G15Q8NCC3 412 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 OR2L3Q8NG85 312 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 GATAD2BQ8WXI9 593 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 RBCK1Q9BYM8 510 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 LRRN3Q9H3W5 708 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 GORASP2Q9H8Y8 452 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 HCN3Q9P1Z3 774 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 TRAV6A0A075B6T7 132 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 TNFRSF10BO14763 440 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 B4GAT1O43505 415 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 SLC14A2Q15849 920 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 RPL13AP3Q6NVV1 102 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 CHERPQ8IWX8 916 aaKnown RBP13.15□□□□□ -0.3
SPAST-201ENST00000315285 C12orf76Q8N812 135 aaPredicted RBP13.15□□□□□ -0.3
SPAST-201ENST00000315285 PAPD5Q8NDF8 572 aaKnown RBP13.15□□□□□ -0.3
SPAST-201ENST00000315285 JPH3Q8WXH2 748 aaPredicted RBP13.15□□□□□ -0.3
SPAST-201ENST00000315285 P2RY13Q9BPV8 354 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 BRF2Q9HAW0 419 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 BTNL2Q9UIR0 455 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 A0A1W2PQU0 124 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 ZNF726A6NNF4 738 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 C2orf74A8MZ97 194 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 GJB3O75712 270 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 MAP2K3P46734 347 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 TAS2R38P59533 333 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 KEAP1Q14145 624 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 GK3PQ14409 553 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 UGT8Q16880 541 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 CPZQ66K79 652 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 PXYLP1Q8TE99 480 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 HSPA12BQ96MM6 686 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 NELL2Q99435 816 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 KLF16Q9BXK1 252 aaPredicted RBP13.15□□□□□ -0.3
SPAST-201ENST00000315285 OR8D2Q9GZM6 311 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 ERVK13-1Q9NX77 482 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 MAU2Q9Y6X3 613 aa13.15□□□□□ -0.3
SPAST-201ENST00000315285 AHSA1O95433 338 aa13.15□□□□□ -0.31
SPAST-201ENST00000315285 VSX2P58304 361 aaPredicted RBP13.15□□□□□ -0.31
SPAST-201ENST00000315285 KLHL26Q53HC5 615 aa13.15□□□□□ -0.31
SPAST-201ENST00000315285 FAM180BQ6P0A1 224 aa13.15□□□□□ -0.31
SPAST-201ENST00000315285 PLEKHG7Q6ZR37 379 aa13.15□□□□□ -0.31
SPAST-201ENST00000315285 SERPINA11Q86U17 422 aa13.15□□□□□ -0.31
SPAST-201ENST00000315285 TEX26Q8N6G2 289 aa13.15□□□□□ -0.31
SPAST-201ENST00000315285 KHSRPQ92945 711 aaKnown RBP eCLIP13.15□□□□□ -0.312e-6■■□□□ 12.7
SPAST-201ENST00000315285 SLC39A13Q96H72 371 aa13.15□□□□□ -0.31
SPAST-201ENST00000315285 MS4A4AQ96JQ5 239 aa13.15□□□□□ -0.31
SPAST-201ENST00000315285 BEX2Q9BXY8 128 aa13.15□□□□□ -0.31
SPAST-201ENST00000315285 IRF2BPLQ9H1B7 796 aa13.15□□□□□ -0.31
SPAST-201ENST00000315285 BEX1Q9HBH7 125 aa13.15□□□□□ -0.31
SPAST-201ENST00000315285 LAMP5Q9UJQ1 280 aa13.15□□□□□ -0.31
SPAST-201ENST00000315285 MAGED1Q9Y5V3 778 aaPredicted RBP13.15□□□□□ -0.31
SPAST-201ENST00000315285 CEPT1Q9Y6K0 416 aa13.15□□□□□ -0.31
SPAST-201ENST00000315285 ANKRD36CQ5JPF3 1778 aa13.15□□□□□ -0.31
SPAST-201ENST00000315285 ITGB4P16144 1822 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 KAT7O95251 611 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 S100A6P06703 90 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 GP1BBP13224 206 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 RAB2AP61019 212 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 MICAQ29983 383 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 SCGB2B2Q4G0G5 96 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 MAVSQ7Z434 540 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 UBE2Q1Q7Z7E8 422 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 SPARTQ8N0X7 666 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 OR9Q2Q8NGE9 314 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 NT5C3BQ969T7 300 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 FAIMQ9NVQ4 179 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 FXYD6-FXYD2A0A087WZ82 144 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 NPIPA5E9PKD4 350 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 GATBO75879 557 aaKnown RBP13.14□□□□□ -0.31
SPAST-201ENST00000315285 NDUFV2P19404 249 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 AAK1Q2M2I8 961 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 BORAQ6PGQ7 559 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 SPATC1Q76KD6 591 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 RETREG3Q86VR2 466 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 WDR92Q96MX6 357 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 FXYD6Q9H0Q3 95 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 TRPV4Q9HBA0 871 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 INTS6Q9UL03 887 aaKnown RBP13.14□□□□□ -0.31
SPAST-201ENST00000315285 NPIPA1Q9UND3 350 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 PCDHGA8Q9Y5G5 932 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 MROH6A6NGR9 719 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 GABBR2O75899 941 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 OSMP13725 252 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 PYCR1P32322 319 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 PCGF2P35227 344 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 OPRL1P41146 370 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 RAB28P51157 221 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 ACTC1P68032 377 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 ACTA1P68133 377 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 NCCRP1Q6ZVX7 275 aaPredicted RBP13.14□□□□□ -0.31
SPAST-201ENST00000315285 ZNF101Q8IZC7 436 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 ACBD7Q8N6N7 88 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 NSMAFQ92636 917 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 SH3YL1Q96HL8 342 aaPredicted RBP13.14□□□□□ -0.31
SPAST-201ENST00000315285 POLDIP3Q9BY77 421 aaKnown RBP13.14□□□□□ -0.31
SPAST-201ENST00000315285 C5AR2Q9P296 337 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 METTL21EPA6NDL7 271 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 TSPAN4O14817 238 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 RBMXL2O75526 392 aaKnown RBP13.14□□□□□ -0.31
SPAST-201ENST00000315285 ARPC4P59998 168 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms