RNA–Protein interactions for RNA: ENST00000311916.6

TWNK-201, Transcript of twinkle mtDNA helicase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TWNK, Length 3,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-201ENST00000311916 USP43Q70EL4 1123 aa11.14□□□□□ -0.63
TWNK-201ENST00000311916 VN1R5Q7Z5H4 357 aa11.14□□□□□ -0.63
TWNK-201ENST00000311916 PDZD3Q86UT5 571 aa11.14□□□□□ -0.63
TWNK-201ENST00000311916 KLHDC8AQ8IYD2 350 aa11.14□□□□□ -0.63
TWNK-201ENST00000311916 SLC34A3Q8N130 599 aa11.14□□□□□ -0.63
TWNK-201ENST00000311916 KBTBD8Q8NFY9 601 aa11.14□□□□□ -0.63
TWNK-201ENST00000311916 OR4C15Q8NGM1 316 aa11.14□□□□□ -0.63
TWNK-201ENST00000311916 HPS1Q92902 700 aa11.14□□□□□ -0.63
TWNK-201ENST00000311916 C12orf66Q96MD2 445 aa11.14□□□□□ -0.63
TWNK-201ENST00000311916 QRFPRQ96P65 431 aa11.14□□□□□ -0.63
TWNK-201ENST00000311916 BBS4Q96RK4 519 aa11.14□□□□□ -0.63
TWNK-201ENST00000311916 SLIRPQ9GZT3 109 aaKnown RBP11.14□□□□□ -0.63
TWNK-201ENST00000311916 ENOPH1Q9UHY7 261 aa11.14□□□□□ -0.63
TWNK-201ENST00000311916 GPR34Q9UPC5 381 aa11.14□□□□□ -0.63
TWNK-201ENST00000311916 WASHC1A8K0Z3 465 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 PDZK1P1A8MUH7 402 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 HAT1O14929 419 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 RGS5O15539 181 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 TSPAN9O75954 239 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 PAPLNO95428 1278 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 DNTTP04053 509 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 IGFBP1P08833 259 aaPredicted RBP11.13□□□□□ -0.63
TWNK-201ENST00000311916 HNRNPA1P09651 372 aaKnown RBP eCLIP11.13□□□□□ -0.63
TWNK-201ENST00000311916 OR12D1P0DN82 309 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 CKMT1AP12532 417 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 CD300CQ08708 224 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 TARDBPQ13148 414 aaKnown RBP eCLIP11.13□□□□□ -0.63
TWNK-201ENST00000311916 OXA1LQ15070 435 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 FRMPD2BQ6IN97 320 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 KLHL17Q6TDP4 642 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 WASH2PQ6VEQ5 465 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 RBM45Q8IUH3 476 aaKnown RBP11.13□□□□□ -0.63
TWNK-201ENST00000311916 RAB42Q8N4Z0 105 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 TMIEQ8NEW7 156 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 OR5D16Q8NGK9 328 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 OR5P2Q8WZ92 322 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 TM4SF18Q96CE8 201 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 MAPKAP1Q9BPZ7 522 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 C17orf62Q9BQA9 187 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 FAM83CQ9BQN1 747 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 MROQ9BYG7 248 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 OR52A5Q9H2C5 316 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 KCNK12Q9HB15 430 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 SLAMF7Q9NQ25 335 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 THSD1Q9NS62 852 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 AP1M2Q9Y6Q5 423 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 ANHXE9PGG2 379 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 PPM1DO15297 605 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 DPM1O60762 260 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 PAK4O96013 591 aaPredicted RBP11.13□□□□□ -0.63
TWNK-201ENST00000311916 LINC00271P0C7V0 271 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 GTF2E2P29084 291 aaKnown RBP11.13□□□□□ -0.63
TWNK-201ENST00000311916 P2RY2P41231 377 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 UGT2B15P54855 530 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 PCDH1Q08174 1060 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 C1orf53Q5VUE5 145 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 SIGIRRQ6IA17 410 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 IKBIPQ70UQ0 350 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 NUDT13Q86X67 352 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 MFSD4AQ8N468 514 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 SCAIQ8N9R8 606 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 ANKRD53Q8N9V6 530 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 SMPDL3AQ92484 453 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 UCN3Q969E3 161 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 WDR34Q96EX3 536 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 ZBED6CLQ96FA7 236 aaPredicted RBP11.13□□□□□ -0.63
TWNK-201ENST00000311916 RBM18Q96H35 190 aaKnown RBP11.13□□□□□ -0.63
TWNK-201ENST00000311916 OR5M11Q96RB7 305 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 ZNF607Q96SK3 696 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 KCNS3Q9BQ31 491 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 UCK2Q9BZX2 261 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 NUAK2Q9H093 628 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 ZCCHC3Q9NUD5 404 aaKnown RBP11.13□□□□□ -0.63
TWNK-201ENST00000311916 KCNK6Q9Y257 313 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 TLR4O00206 839 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 SNPHO15079 494 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 H1F0P07305 194 aaKnown RBP11.13□□□□□ -0.63
TWNK-201ENST00000311916 CHRM5P08912 532 aaPredicted RBP11.13□□□□□ -0.63
TWNK-201ENST00000311916 ACVR2AP27037 513 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 PPP5CP53041 499 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 HTRA4P83105 476 aaPredicted RBP11.13□□□□□ -0.63
TWNK-201ENST00000311916 TPRG1LQ5T0D9 272 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 SLC46A3Q7Z3Q1 461 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 LRRC56Q8IYG6 542 aaPredicted RBP11.13□□□□□ -0.63
TWNK-201ENST00000311916 ADGRF3Q8IZF5 1079 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 DTX3Q8N9I9 347 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 RGMAQ96B86 450 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 MGLLQ99685 303 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 NEURL2Q9BR09 285 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 POLR2J3Q9H1A7 115 aaKnown RBP11.13□□□□□ -0.63
TWNK-201ENST00000311916 MMP27Q9H306 513 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 C12orf4Q9NQ89 552 aa11.13□□□□□ -0.63
TWNK-201ENST00000311916 TEX10Q9NXF1 929 aaPredicted RBP11.13□□□□□ -0.63
TWNK-201ENST00000311916 TCF20Q9UGU0 1960 aaKnown RBP11.13□□□□□ -0.63
TWNK-201ENST00000311916 EFCAB10A6NFE3 127 aa11.12□□□□□ -0.63
TWNK-201ENST00000311916 PDE9AO76083 593 aa11.12□□□□□ -0.63
TWNK-201ENST00000311916 KLHL18O94889 574 aa11.12□□□□□ -0.63
TWNK-201ENST00000311916 PPP2R1BP30154 601 aa11.12□□□□□ -0.63
TWNK-201ENST00000311916 GRK5P34947 590 aa11.12□□□□□ -0.63
TWNK-201ENST00000311916 SOX6P35712 828 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms