RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 ELAVL4P26378 380 aaKnown RBP13.95□□□□□ -0.18
COL6A2-202ENST00000310645 PBLDP30039 288 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-202ENST00000310645 SSTR2P30874 369 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 AGFG1P52594 562 aaKnown RBP13.95□□□□□ -0.18
COL6A2-202ENST00000310645 WNT4P56705 351 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 FGFBP1Q14512 234 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 CDKN3Q16667 212 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 MPEG1Q2M385 716 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 PLK5Q496M5 336 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 SYT14P1Q58G82 188 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 RNASE12Q5GAN4 147 aaKnown RBP13.95□□□□□ -0.18
COL6A2-202ENST00000310645 CRB2Q5IJ48 1285 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 CDKL4Q5MAI5 379 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 ACSM5Q6NUN0 579 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 KRT74Q7RTS7 529 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 OLIG3Q7RTU3 272 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 LSRQ86X29 649 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-202ENST00000310645 HOMEZQ8IX15 550 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 UFD1Q92890 307 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 DPCDQ9BVM2 203 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-202ENST00000310645 ACAT2Q9BWD1 397 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 SORBS1Q9BX66 1292 aaKnown RBP13.95□□□□□ -0.18
COL6A2-202ENST00000310645 CDCP1Q9H5V8 836 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 MVB12BQ9H7P6 319 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 NCKAP1Q9Y2A7 1128 aa13.95□□□□□ -0.18
COL6A2-202ENST00000310645 A8MVJ9 347 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 SEMA7AO75326 666 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 CELF2O95319 508 aaKnown RBP13.94□□□□□ -0.18
COL6A2-202ENST00000310645 SLC16A8O95907 504 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 KLK1P06870 262 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 POLR2CP19387 275 aaPredicted RBP13.94□□□□□ -0.18
COL6A2-202ENST00000310645 C16orf62Q7Z3J2 963 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 COMMD6Q7Z4G1 85 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 SLC30A8Q8IWU4 369 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 LRRC17Q8N6Y2 441 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 DUSP18Q8NEJ0 188 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 DNAJA4Q8WW22 397 aaPredicted RBP13.94□□□□□ -0.18
COL6A2-202ENST00000310645 SMAD5Q99717 465 aaKnown RBP13.94□□□□□ -0.18
COL6A2-202ENST00000310645 TMEM43Q9BTV4 400 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 ING4Q9UNL4 249 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 CD8B2A6NJW9 211 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 OR6C75A6NL08 312 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 NPIPB8E9PQR5 432 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 PRRG1O14668 218 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 TSPAN4O14817 238 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 SHOXO15266 292 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 SEC14L5O43304 696 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 RFPL3O75679 317 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 PAHP00439 452 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 SYPP08247 313 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 CD8BP10966 210 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 CELP19835 753 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 AP1S2P56377 157 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 SMAD3P84022 425 aaKnown RBP13.94□□□□□ -0.18
COL6A2-202ENST00000310645 ZNF763Q0D2J5 394 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 PRSS53Q2L4Q9 553 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 KLHL22Q53GT1 634 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 TCTN3Q6NUS6 607 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 ZNF680Q8NEM1 530 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL6A2-202ENST00000310645 SLC7A13Q8TCU3 470 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 GULP1Q9UBP9 304 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 CLCA2Q9UQC9 943 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 POLHQ9Y253 713 aa13.94□□□□□ -0.18
COL6A2-202ENST00000310645 GFYI3L273 518 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 AKAP8O43823 692 aaKnown RBP13.93□□□□□ -0.18
COL6A2-202ENST00000310645 SLC43A1O75387 559 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 TSPAN9O75954 239 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 GSTM1P09488 218 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 ARAFP10398 606 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 ATP1B2P14415 290 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-202ENST00000310645 SRP54P61011 504 aaKnown RBP13.93□□□□□ -0.18
COL6A2-202ENST00000310645 EEF1A2Q05639 463 aaKnown RBP13.93□□□□□ -0.18
COL6A2-202ENST00000310645 REEP3Q6NUK4 255 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 TAS1R1Q7RTX1 841 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 MARVELD1Q9BSK0 173 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 BHLHE41Q9C0J9 482 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-202ENST00000310645 GPBP1L1Q9HC44 474 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-202ENST00000310645 MGAT4BQ9UQ53 548 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 DSPPQ9NZW4 1301 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 PLXNA3P51805 1871 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 A0A0A6YYJ9 748 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 SYN3O14994 580 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 LHCGRP22888 699 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 EVX1P49640 407 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 PLD1Q13393 1074 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 SPIN4Q56A73 249 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 C12orf73Q69YU5 71 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 FAAH2Q6GMR7 532 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 RETSATQ6NUM9 610 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 PGBD2Q6P3X8 592 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 IL20RBQ6UXL0 311 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 NEIL2Q969S2 332 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 RNFT2Q96EX2 444 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 C11orf24Q96F05 449 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-202ENST00000310645 OTUB1Q96FW1 271 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-202ENST00000310645 SENP5Q96HI0 755 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-202ENST00000310645 ART5Q96L15 291 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 ZNF582Q96NG8 517 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-202ENST00000310645 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms