RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 PCDHGB2Q9Y5G2 931 aa9.83□□□□□ -0.84
APOBEC3F-201ENST00000308521 PCDHGA2Q9Y5H1 932 aa9.83□□□□□ -0.84
APOBEC3F-201ENST00000308521 SDK1Q7Z5N4 2213 aa9.83□□□□□ -0.84
APOBEC3F-201ENST00000308521 ZNF106Q9H2Y7 1883 aaKnown RBP9.83□□□□□ -0.84
APOBEC3F-201ENST00000308521 A0A0X1KG70 313 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 C1QTNF3-AMACRE9PGA6 284 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 PAK4O96013 591 aaPredicted RBP9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 STSP08842 583 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 ACADMP11310 421 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 SLC15A1P46059 708 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 GNA13Q14344 377 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 RAB43Q86YS6 212 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 TRAPPC5Q8IUR0 188 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 OR8J2Q8NGG1 315 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 CXorf40AQ8TE69 158 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 MAGEB10Q96LZ2 347 aaPredicted RBP9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 Q96MT0 163 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 SLC30A2Q9BRI3 323 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 LGR4Q9BXB1 951 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 CDCA4Q9BXL8 241 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 ATG10Q9H0Y0 220 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 CD93Q9NPY3 652 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 TAS2R7Q9NYW3 318 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 GLTPQ9NZD2 209 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 POFUT2Q9Y2G5 429 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 PCDHB11Q9Y5F2 797 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 ADAMDEC1O15204 470 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 SUV39H1O43463 412 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 NARSO43776 548 aaKnown RBP9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 PTHP01270 115 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 HMGN1P05114 100 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 PCCBP05166 539 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 PPIBP23284 216 aaKnown RBP9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 MAT2AP31153 395 aaKnown RBP9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 CTHP32929 405 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 DCDC1P59894 354 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 ZNF33BQ06732 778 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 CCSMST1Q4G0I0 132 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 TMEM196Q5HYL7 178 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 NOXRED1Q6NXP6 359 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 ZNF621Q6ZSS3 439 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 GALNT10Q86SR1 603 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 CYP4Z2PQ8N1L4 340 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 SNAPC3Q92966 411 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 APIPQ96GX9 242 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 CHCHD6Q9BRQ6 235 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 DOHHQ9BU89 302 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 TMEM168Q9H0V1 697 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 CHST8Q9H2A9 424 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 RNF167Q9H6Y7 350 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 KCNK12Q9HB15 430 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 TAS2R9Q9NYW1 312 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 CORO2BQ9UQ03 480 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 PIAS3Q9Y6X2 628 aa9.82□□□□□ -0.84
APOBEC3F-201ENST00000308521 TNFRSF11BO00300 401 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 SCAMP1O15126 338 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 KIAA0513O60268 411 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 LRATO95237 230 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 C1QCP02747 245 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 MLLT3P42568 568 aaPredicted RBP9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 ALDH9A1P49189 494 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 ST3GAL4Q11206 333 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 UGT8Q16880 541 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 AGBL4Q5VU57 503 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 ZNF517Q6ZMY9 492 aaPredicted RBP9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 Q6ZPB1 254 aaPredicted RBP9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 NUDT18Q6ZVK8 323 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 RNF130Q86XS8 419 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 GATAD2AQ86YP4 633 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 CFAP206Q8IYR0 622 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 LINC00518Q8N0U6 118 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 OR4C15Q8NGM1 316 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 OR2A14Q96R47 310 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 PHOX2BQ99453 314 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 FEVQ99581 238 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 MBNL1Q9NR56 388 aaKnown RBP9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 GPR83Q9NYM4 423 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 CNOT2Q9NZN8 540 aaKnown RBP9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 GULP1Q9UBP9 304 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 TBC1D24Q9ULP9 559 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 BTBD3Q9Y2F9 522 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 SH3D21A4FU49 640 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 EFCAB10A6NFE3 127 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 TMEM229AB2RXF0 380 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 TOR1AO14656 332 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 GALR2O43603 387 aaPredicted RBP9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 SEMA3DO95025 777 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 KLF8O95600 359 aaPredicted RBP9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 DNTTP04053 509 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 ATF4P18848 351 aaPredicted RBP9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 COL9A1P20849 921 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 PCGF2P35227 344 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 TCEA2Q15560 299 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 TBRG1Q3YBR2 411 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 BCL7AQ4VC05 210 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 SOWAHCQ53LP3 525 aaPredicted RBP9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 MTSS1LQ765P7 747 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 TSEN54Q7Z6J9 526 aaKnown RBP9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 IL17RCQ8NAC3 791 aa9.81□□□□□ -0.84
APOBEC3F-201ENST00000308521 OR10G2Q8NGC3 310 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms