RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 HS3ST3B1Q9Y662 390 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 CHD8Q9HCK8 2581 aa25.39■■□□□ 1.66
HDAC3-201ENST00000305264 IGHV3-20A0A0C4DH32 117 aa25.39■■□□□ 1.66
HDAC3-201ENST00000305264 CCDC154A6NI56 674 aa25.39■■□□□ 1.66
HDAC3-201ENST00000305264 CAPN14A8MX76 684 aa25.39■■□□□ 1.66
HDAC3-201ENST00000305264 OR10H2O60403 315 aa25.39■■□□□ 1.66
HDAC3-201ENST00000305264 IFNA16P05015 189 aa25.39■■□□□ 1.66
HDAC3-201ENST00000305264 LTB4RQ15722 352 aa25.39■■□□□ 1.66
HDAC3-201ENST00000305264 DOK4Q8TEW6 326 aa25.39■■□□□ 1.66
HDAC3-201ENST00000305264 ZBED6CLQ96FA7 236 aaPredicted RBP25.39■■□□□ 1.66
HDAC3-201ENST00000305264 DGAT2Q96PD7 388 aa25.39■■□□□ 1.66
HDAC3-201ENST00000305264 PNO1Q9NRX1 252 aaKnown RBP25.39■■□□□ 1.66
HDAC3-201ENST00000305264 FAM120CQ9NX05 1096 aaKnown RBP25.39■■□□□ 1.66
HDAC3-201ENST00000305264 ATP1B1P05026 303 aa25.38■■□□□ 1.65
HDAC3-201ENST00000305264 MMP11P24347 488 aa25.38■■□□□ 1.65
HDAC3-201ENST00000305264 OTX2P32243 289 aa25.38■■□□□ 1.65
HDAC3-201ENST00000305264 HSPB3Q12988 150 aa25.38■■□□□ 1.65
HDAC3-201ENST00000305264 SNX32Q86XE0 403 aa25.38■■□□□ 1.65
HDAC3-201ENST00000305264 POU5F2Q8N7G0 328 aa25.38■■□□□ 1.65
HDAC3-201ENST00000305264 OR9A2Q8NGT5 310 aa25.38■■□□□ 1.65
HDAC3-201ENST00000305264 PCSK5Q92824 1860 aa25.38■■□□□ 1.65
HDAC3-201ENST00000305264 A8MUA0 341 aa25.38■■□□□ 1.65
HDAC3-201ENST00000305264 RNASET2O00584 256 aaKnown RBP25.38■■□□□ 1.65
HDAC3-201ENST00000305264 CREG1O75629 220 aa25.38■■□□□ 1.65
HDAC3-201ENST00000305264 C6orf47O95873 294 aa25.38■■□□□ 1.65
HDAC3-201ENST00000305264 CAPNS1P04632 268 aa25.38■■□□□ 1.65
HDAC3-201ENST00000305264 SNRPB2P08579 225 aaKnown RBP25.38■■□□□ 1.65
HDAC3-201ENST00000305264 EEF1A2Q05639 463 aaKnown RBP25.38■■□□□ 1.65
HDAC3-201ENST00000305264 PPP1R32Q7Z5V6 425 aa25.38■■□□□ 1.65
HDAC3-201ENST00000305264 ADCY4Q8NFM4 1077 aa25.38■■□□□ 1.65
HDAC3-201ENST00000305264 ACSS1Q9NUB1 689 aaPredicted RBP25.38■■□□□ 1.65
HDAC3-201ENST00000305264 CFAP47Q6ZTR5 3102 aa25.38■■□□□ 1.65
HDAC3-201ENST00000305264 LOC100653049A0A140TA62 436 aa25.37■■□□□ 1.65
HDAC3-201ENST00000305264 A0A1W2PRB8 838 aa25.37■■□□□ 1.65
HDAC3-201ENST00000305264 CFLARO15519 480 aa25.37■■□□□ 1.65
HDAC3-201ENST00000305264 KRT34O76011 436 aa25.37■■□□□ 1.65
HDAC3-201ENST00000305264 WT1P19544 449 aaPredicted RBP25.37■■□□□ 1.65
HDAC3-201ENST00000305264 MPIP34949 423 aa25.37■■□□□ 1.65
HDAC3-201ENST00000305264 MANFP55145 182 aaKnown RBP25.37■■□□□ 1.65
HDAC3-201ENST00000305264 OR4D2P58180 307 aa25.37■■□□□ 1.65
HDAC3-201ENST00000305264 SSPNQ14714 243 aa25.37■■□□□ 1.65
HDAC3-201ENST00000305264 SFT2D3Q587I9 215 aa25.37■■□□□ 1.65
HDAC3-201ENST00000305264 RBM18Q96H35 190 aaKnown RBP25.37■■□□□ 1.65
HDAC3-201ENST00000305264 ADAP2Q9NPF8 381 aa25.37■■□□□ 1.65
HDAC3-201ENST00000305264 LAMA5O15230 3695 aa25.37■■□□□ 1.65
HDAC3-201ENST00000305264 PRSS51A0A1B0GVH4 220 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 SOCS6O14544 535 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 ANXA8L1Q5VT79 327 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 FAM91A1Q658Y4 838 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 SLC2A7Q6PXP3 512 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 NATD1Q8N6N6 113 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 ERVK-11Q9UQG0 969 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 A0A1W2PP18 115 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 C1QTNF9BB2RNN3 333 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 KLK10O43240 276 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 IGHEP01854 428 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 C1QTNF9P0C862 333 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 NT5EP21589 574 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 SOX18P35713 384 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 BIKQ13323 160 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 TLR1Q15399 786 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 ELAVL1Q15717 326 aaKnown RBP25.36■■□□□ 1.65
HDAC3-201ENST00000305264 KIRREL2Q6UWL6 708 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 CPEB2Q7Z5Q1 589 aaKnown RBP25.36■■□□□ 1.65
HDAC3-201ENST00000305264 AMER2Q8N7J2 671 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 PTPMT1Q8WUK0 201 aaPredicted RBP25.36■■□□□ 1.65
HDAC3-201ENST00000305264 WDR77Q9BQA1 342 aaPredicted RBP25.36■■□□□ 1.65
HDAC3-201ENST00000305264 EFHD1Q9BUP0 239 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 SLC25A23Q9BV35 468 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 SERHLQ9NQF3 203 aa25.36■■□□□ 1.65
HDAC3-201ENST00000305264 C19orf25Q9UFG5 118 aaPredicted RBP25.36■■□□□ 1.65
HDAC3-201ENST00000305264 LOC102723996A0A087X1L8 192 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 CT62P0C5K7 136 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 CDK9P50750 372 aaKnown RBP25.35■■□□□ 1.65
HDAC3-201ENST00000305264 HBA1P69905 142 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 MRPS35P82673 323 aaKnown RBP25.35■■□□□ 1.65
HDAC3-201ENST00000305264 MAPRE2Q15555 327 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 RETREG3Q86VR2 466 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 ZFP28Q8NHY6 868 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 ADAMTS17Q8TE56 1095 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 RIT1Q92963 219 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 CCDC115Q96NT0 180 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 PELOQ9BRX2 385 aaKnown RBP25.35■■□□□ 1.65
HDAC3-201ENST00000305264 INPP5KQ9BT40 448 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 CXorf21Q9HAI6 301 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 C17orf105B2RV13 164 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 FBP2O00757 339 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 ABCB1P08183 1280 aaPredicted RBP25.35■■□□□ 1.65
HDAC3-201ENST00000305264 COX4I1P13073 169 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 CYLC2Q14093 348 aaPredicted RBP25.35■■□□□ 1.65
HDAC3-201ENST00000305264 MLC1Q15049 377 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 MAPKAPK3Q16644 382 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 PRICKLE4Q2TBC4 344 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 ZNF628Q5EBL2 1059 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 PAGE3Q5JUK9 113 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 MSANTD1Q6ZTZ1 278 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 TRPM8Q7Z2W7 1104 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 GALNT12Q8IXK2 581 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 VPS37AQ8NEZ2 397 aa25.35■■□□□ 1.65
HDAC3-201ENST00000305264 TSPEARQ8WU66 669 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms