RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 AIMP2Q13155 320 aaKnown RBP22.87■■□□□ 1.25
HOXC9-201ENST00000303450 PRSS53Q2L4Q9 553 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 COL28A1Q2UY09 1125 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 BTBD16Q32M84 506 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 BORAQ6PGQ7 559 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 PTPMT1Q8WUK0 201 aaPredicted RBP22.87■■□□□ 1.25
HOXC9-201ENST00000303450 RIT1Q92963 219 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 TMEM120AQ9BXJ8 343 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 BRINP2Q9C0B6 783 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 ATP6V1HQ9UI12 483 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 GPR45Q9Y5Y3 372 aa22.87■■□□□ 1.25
HOXC9-201ENST00000303450 GMNCA6NCL1 334 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 NT5EP21589 574 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 NTSP30990 170 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 GALNSP34059 522 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 MPIP34949 423 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 PGDP52209 483 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 ARFIP2P53365 341 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 C21orf58P58505 322 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 SLC26A5P58743 744 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 CPTPQ5TA50 214 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 PLAG1Q6DJT9 500 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 APLFQ8IW19 511 aaPredicted RBP22.86■■□□□ 1.25
HOXC9-201ENST00000303450 RIMKLAQ8IXN7 391 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 CCDC116Q8IYX3 515 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 B3GNT7Q8NFL0 401 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 OR7A2PQ8NGA2 310 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 ATAD3AQ9NVI7 634 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 KLHL14Q9P2G3 628 aa22.86■■□□□ 1.25
HOXC9-201ENST00000303450 PDPK1O15530 556 aa22.85■■□□□ 1.25
HOXC9-201ENST00000303450 ATP1B1P05026 303 aa22.85■■□□□ 1.25
HOXC9-201ENST00000303450 ITGB2P05107 769 aa22.85■■□□□ 1.25
HOXC9-201ENST00000303450 AP2B1P63010 937 aa22.85■■□□□ 1.25
HOXC9-201ENST00000303450 CEBPEQ15744 281 aa22.85■■□□□ 1.25
HOXC9-201ENST00000303450 TBR1Q16650 682 aa22.85■■□□□ 1.25
HOXC9-201ENST00000303450 C6orf163Q5TEZ5 329 aa22.85■■□□□ 1.25
HOXC9-201ENST00000303450 DGAT2L6Q6ZPD8 337 aa22.85■■□□□ 1.25
HOXC9-201ENST00000303450 KBTBD2Q8IY47 623 aa22.85■■□□□ 1.25
HOXC9-201ENST00000303450 NFAM1Q8NET5 270 aaPredicted RBP22.85■■□□□ 1.25
HOXC9-201ENST00000303450 M1APQ8TC57 530 aa22.85■■□□□ 1.25
HOXC9-201ENST00000303450 FAM107BQ9H098 131 aa22.85■■□□□ 1.25
HOXC9-201ENST00000303450 NSRP1Q9H0G5 558 aaKnown RBP22.85■■□□□ 1.25
HOXC9-201ENST00000303450 LOC400499M0QZD8 3231 aa22.85■■□□□ 1.25
HOXC9-201ENST00000303450 MYO1GB0I1T2 1018 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 ANKRD28O15084 1053 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 ITGA3P26006 1051 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 CCL11P51671 97 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 CLNS1AP54105 237 aaKnown RBP22.84■■□□□ 1.25
HOXC9-201ENST00000303450 STX1BP61266 288 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 UFM1P61960 85 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 DUSP2Q05923 314 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 Q0VFX4 171 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 PDCD4Q53EL6 469 aaKnown RBP22.84■■□□□ 1.25
HOXC9-201ENST00000303450 ZNF385BQ569K4 471 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 GALNT12Q8IXK2 581 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 MORN4Q8NDC4 146 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 NUDT8Q8WV74 236 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 EXTL1Q92935 676 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 OR8D2Q9GZM6 311 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 CXorf21Q9HAI6 301 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 TRIM33Q9UPN9 1127 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 MGAQ8IWI9 3026 aa22.84■■□□□ 1.25
HOXC9-201ENST00000303450 DNAJB5O75953 348 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 SERPINA7P05543 415 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 CELA2AP08217 269 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 LAMP1P11279 417 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 NCBP2P52298 156 aaKnown RBP eCLIP22.83■■□□□ 1.25
HOXC9-201ENST00000303450 ZNF267Q14586 743 aaPredicted RBP22.83■■□□□ 1.25
HOXC9-201ENST00000303450 SPRED3Q2MJR0 410 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 PGS1Q32NB8 556 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 IRAK1BP1Q5VVH5 260 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 CPLX4Q7Z7G2 160 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 MIER2Q8N344 545 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 GALNT16Q8N428 558 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 AMER2Q8N7J2 671 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 SLC2A12Q8TD20 617 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 DOK4Q8TEW6 326 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 CIDECQ96AQ7 238 aaPredicted RBP22.83■■□□□ 1.25
HOXC9-201ENST00000303450 THOC3Q96J01 351 aaKnown RBP22.83■■□□□ 1.25
HOXC9-201ENST00000303450 ART5Q96L15 291 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 ZBTB18Q99592 522 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 CNPPD1Q9BV87 410 aa22.83■■□□□ 1.25
HOXC9-201ENST00000303450 SDR39U1Q9NRG7 319 aaPredicted RBP22.83■■□□□ 1.25
HOXC9-201ENST00000303450 PPIEQ9UNP9 301 aaKnown RBP22.83■■□□□ 1.25
HOXC9-201ENST00000303450 A6NL46 340 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 NCF2P19878 526 aaPredicted RBP22.82■■□□□ 1.24
HOXC9-201ENST00000303450 NATD1Q8N6N6 113 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 ADCY4Q8NFM4 1077 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 SUN3Q8TAQ9 357 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 NCLNQ969V3 563 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 COQ8BQ96D53 544 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 ZBED6CLQ96FA7 236 aaPredicted RBP22.82■■□□□ 1.24
HOXC9-201ENST00000303450 VMP1Q96GC9 406 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 SENP5Q96HI0 755 aaPredicted RBP22.82■■□□□ 1.24
HOXC9-201ENST00000303450 MMP25Q9NPA2 562 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 COPS7AQ9UBW8 275 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 EPG5Q9HCE0 2579 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 SLC22A3O75751 556 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 DDAH2O95865 285 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 PTGER1P34995 402 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms