RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 CLOCKO15516 846 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 DNAJB6O75190 326 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 GCM2O75603 506 aaPredicted RBP14.66□□□□□ -0.06
LSM6-201ENST00000296581 ARAFP10398 606 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 UQCRBP14927 111 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 GLB1P16278 677 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 CKMT2P17540 419 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 PCSK6P29122 969 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 EPHA8P29322 1005 aaPredicted RBP14.66□□□□□ -0.06
LSM6-201ENST00000296581 HOXD11P31277 338 aaPredicted RBP14.66□□□□□ -0.06
LSM6-201ENST00000296581 CCT3P49368 545 aaKnown RBP14.66□□□□□ -0.06
LSM6-201ENST00000296581 CRYBA2P53672 197 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 SPDYE7PQ495Y7 208 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 PPP4R4Q6NUP7 873 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 EIF3MQ7L2H7 374 aaKnown RBP14.66□□□□□ -0.06
LSM6-201ENST00000296581 PRSS41Q7RTY9 318 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 C6orf120Q7Z4R8 191 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 PACRGLQ8N7B6 248 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 TMEM105Q8N8V8 129 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 ZDHHC12Q96GR4 267 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 ZC3H10Q96K80 434 aaKnown RBP14.66□□□□□ -0.06
LSM6-201ENST00000296581 TGM7Q96PF1 710 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 SLC29A1Q99808 456 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 BDH2Q9BUT1 245 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 FBXO4Q9UKT5 387 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 PADI4Q9UM07 663 aa14.66□□□□□ -0.06
LSM6-201ENST00000296581 ARID1BQ8NFD5 2236 aaPredicted RBP14.65□□□□□ -0.06
LSM6-201ENST00000296581 CABIN1Q9Y6J0 2220 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 IGHV1OR21-1A0A087WYE8 117 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 A0A1B0GTQ1 180 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 DEAF1O75398 565 aaPredicted RBP14.65□□□□□ -0.06
LSM6-201ENST00000296581 C9P02748 559 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 SEMG1P04279 462 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 CTSBP07858 339 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 MAGEA2P43356 314 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 GPR3P46089 330 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 PRIM2P49643 509 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 CHN2P52757 468 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 DSTNP60981 165 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 SCARB2Q14108 478 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 ZNF750Q32MQ0 723 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 FKBP9P1Q75LS8 142 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 SPRED1Q7Z699 444 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 SFXN5Q8TD22 340 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 CLIP3Q96DZ5 547 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 CSF3RQ99062 836 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 NPLQ9BXD5 320 aaPredicted RBP14.65□□□□□ -0.06
LSM6-201ENST00000296581 NTN4Q9HB63 628 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 SEMA3GQ9NS98 782 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 STARD5Q9NSY2 213 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 ZNF639Q9UID6 485 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 NAALAD2Q9Y3Q0 740 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 ZNF780BQ9Y6R6 833 aa14.65□□□□□ -0.06
LSM6-201ENST00000296581 A0A1W2PS29 197 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 SAC3D1A6NKF1 404 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 ACOX3O15254 700 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 TFAP2AP05549 437 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 ALDH4A1P30038 563 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 TLX1P31314 330 aaPredicted RBP14.64□□□□□ -0.07
LSM6-201ENST00000296581 MPIP34949 423 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 GPC1P35052 558 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 HSPA13P48723 471 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 OR1D5P58170 312 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 CDK6Q00534 326 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 INAQ16352 499 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 NADK2Q4G0N4 442 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 TMTC4Q5T4D3 741 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 NKAIN2Q5VXU1 208 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 UGT2A3Q6UWM9 527 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 ZBTB49Q6ZSB9 765 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 GALNT10Q86SR1 603 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 SLC30A8Q8IWU4 369 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 CCDC116Q8IYX3 515 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 SAMD14Q8IZD0 417 aaPredicted RBP14.64□□□□□ -0.07
LSM6-201ENST00000296581 CARFQ8N187 725 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 GALNT4Q8N4A0 578 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 HORMAD2Q8N7B1 307 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 VPS50Q96JG6 964 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 ZNF597Q96LX8 424 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 C9orf16Q9BUW7 83 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 C8orf4Q9NR00 106 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 NLGN3Q9NZ94 848 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 IGHV5-51A0A0C4DH38 117 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 ZNF860A6NHJ4 632 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 UPK1AO00322 258 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 ZNF682O95780 498 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 C8orf89P0DMQ9 161 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 FEN1P39748 380 aaKnown RBP14.64□□□□□ -0.07
LSM6-201ENST00000296581 OLR1P78380 273 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 ELOAQ14241 798 aaKnown RBP14.64□□□□□ -0.07
LSM6-201ENST00000296581 PDK3Q15120 406 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 CEACAM20Q6UY09 585 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 CA13Q8N1Q1 262 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 METTL25Q8N6Q8 603 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 DTWD2Q8NBA8 298 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 NFKBIDQ8NI38 313 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 PIGKQ92643 395 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 MOAP1Q96BY2 351 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 A4GALTQ9NPC4 353 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 DNAJB9Q9UBS3 223 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms