RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 SGCZQ96LD1 299 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 MCMBPQ9BTE3 642 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 MS4A8Q9BY19 250 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 TRIM31Q9BZY9 425 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 DERL2Q9GZP9 239 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 LYRM4Q9HD34 91 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 RASSF1Q9NS23 344 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 MOCS1Q9NZB8 636 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 GPRC5BQ9NZH0 403 aa8.54□□□□□ -1.04
CNOT9-202ENST00000295701 FLNAP21333 2647 aaKnown RBP8.54□□□□□ -1.04
CNOT9-202ENST00000295701 SYT5O00445 386 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 CCNT2O60583 730 aaKnown RBP8.53□□□□□ -1.04
CNOT9-202ENST00000295701 HCN1O60741 890 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 STK16O75716 305 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 IGKV3-11P04433 115 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 CD1DP15813 335 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 BMP5P22003 454 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 CPN2P22792 545 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 GGT5P36269 586 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 MSH2P43246 934 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 AGFG1P52594 562 aaKnown RBP8.53□□□□□ -1.04
CNOT9-202ENST00000295701 ADAM8P78325 824 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 MRPS25P82663 173 aaKnown RBP8.53□□□□□ -1.04
CNOT9-202ENST00000295701 IRF8Q02556 426 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 PDIA2Q13087 525 aaKnown RBP8.53□□□□□ -1.04
CNOT9-202ENST00000295701 CHIT1Q13231 466 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 SLAMF1Q13291 335 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 SERTAD2Q14140 314 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 MORF4L2Q15014 288 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 MPEG1Q2M385 716 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 SLC25A35Q3KQZ1 300 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 RIPPLY2Q5TAB7 128 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 C18orf63Q68DL7 685 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 BICRALQ6AI39 1079 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 POMZP3Q6PJE2 187 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 Q71RC1 249 aaPredicted RBP8.53□□□□□ -1.04
CNOT9-202ENST00000295701 CDC20BQ86Y33 519 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 GPSM1Q86YR5 675 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 ULK2Q8IYT8 1036 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 PAQR8Q8TEZ7 354 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 ZNF473Q8WTR7 871 aaKnown RBP8.53□□□□□ -1.04
CNOT9-202ENST00000295701 EXT2Q93063 718 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 WDR34Q96EX3 536 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 PTCD3Q96EY7 689 aaKnown RBP8.53□□□□□ -1.04
CNOT9-202ENST00000295701 VPS39Q96JC1 886 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 JSRP1Q96MG2 331 aaPredicted RBP8.53□□□□□ -1.04
CNOT9-202ENST00000295701 DGAT2Q96PD7 388 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 KCNC2Q96PR1 638 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 SMR3AQ99954 134 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 SH3GL2Q99962 352 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 PITHD1Q9GZP4 211 aaPredicted RBP8.53□□□□□ -1.04
CNOT9-202ENST00000295701 CLEC4MQ9H2X3 399 aaPredicted RBP8.53□□□□□ -1.04
CNOT9-202ENST00000295701 EPB41L4BQ9H329 900 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 OR51B5Q9H339 312 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 RHOJQ9H4E5 214 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 EHD1Q9H4M9 534 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 ZNF703Q9H7S9 590 aaPredicted RBP8.53□□□□□ -1.04
CNOT9-202ENST00000295701 DMRT3Q9NQL9 472 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 DLL4Q9NR61 685 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 FRRS1LQ9P0K9 344 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 PTBP2Q9UKA9 531 aaKnown RBP8.53□□□□□ -1.04
CNOT9-202ENST00000295701 SNX12Q9UMY4 172 aa8.53□□□□□ -1.04
CNOT9-202ENST00000295701 RPH3AQ9Y2J0 694 aaPredicted RBP8.53□□□□□ -1.04
CNOT9-202ENST00000295701 A0A1W2PS29 197 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 ACSL3O95573 720 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 CLPSP04118 112 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 PCNAP12004 261 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 HIST1H1TP22492 207 aaPredicted RBP8.52□□□□□ -1.05
CNOT9-202ENST00000295701 DNASE1P24855 282 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 GSTM2P28161 218 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 SSTR1P30872 391 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 STT3AP46977 705 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 HNRNPH2P55795 449 aaKnown RBP8.52□□□□□ -1.05
CNOT9-202ENST00000295701 ARL4CP56559 192 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 HERVK_113P63132 956 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 ERVK-8P63133 956 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 PPP2R2AP63151 447 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 KCNJ2P63252 427 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 IGLV3-21P80748 117 aaPredicted RBP8.52□□□□□ -1.05
CNOT9-202ENST00000295701 DLG1Q12959 904 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 RCN2Q14257 317 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 FRG1Q14331 258 aaKnown RBP8.52□□□□□ -1.05
CNOT9-202ENST00000295701 ZNF267Q14586 743 aaPredicted RBP8.52□□□□□ -1.05
CNOT9-202ENST00000295701 PDK4Q16654 411 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 SWI5Q1ZZU3 235 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 AP5B1Q2VPB7 878 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 OR4C11Q6IEV9 310 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 SULT1C3Q6IMI6 304 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 SHISA2Q6UWI4 295 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 TREML1Q86YW5 311 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 FAM13CQ8NE31 585 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 MYRIPQ8NFW9 859 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 NEIL3Q8TAT5 605 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 LINC01560Q8TB33 94 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 NINJ1Q92982 152 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 LRRC39Q96DD0 335 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 SPACA9Q96E40 222 aaPredicted RBP8.52□□□□□ -1.05
CNOT9-202ENST00000295701 TBCDQ9BTW9 1192 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 ERVK-6Q9BXR3 956 aa8.52□□□□□ -1.05
CNOT9-202ENST00000295701 CAPS2Q9BXY5 557 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms