RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 RIOX1Q9H6W3 641 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 FAM237AA0A1B0GTK4 181 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 SLC7A4O43246 635 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 PRICKLE3O43900 615 aaPredicted RBP11.93□□□□□ -0.5
SLX4-201ENST00000294008 CHRM4P08173 479 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 OR12D1P0DN82 309 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 GABREP78334 506 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 ZNF529Q6P280 563 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 FAM122CQ6P4D5 195 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 UEVLDQ8IX04 471 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 PLCXD1Q9NUJ7 323 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 KLHL9Q9P2J3 617 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 POU3F2P20265 443 aaPredicted RBP11.93□□□□□ -0.5
SLX4-201ENST00000294008 DDCP20711 480 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 LMO2P25791 158 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 PIK3CBP42338 1070 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 ASPAP45381 313 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 IRF9Q00978 393 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 KCTD18Q6PI47 426 aaPredicted RBP11.93□□□□□ -0.5
SLX4-201ENST00000294008 GNPDA2Q8TDQ7 276 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 ZDHHC16Q969W1 377 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 MCHR1Q99705 422 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 NMUR2Q9GZQ4 415 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 VDAC3Q9Y277 283 aa11.93□□□□□ -0.5
SLX4-201ENST00000294008 CD8B2A6NJW9 211 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 FAM171A2A8MVW0 826 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 AQP7O14520 342 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 AGPAT2O15120 278 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 TIMM8AO60220 97 aaPredicted RBP11.92□□□□□ -0.5
SLX4-201ENST00000294008 CD8BP10966 210 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 ADH6P28332 368 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 GDF5P43026 501 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 UBE2G2P60604 165 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 DDR1Q08345 913 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 SF3B4Q15427 424 aaKnown RBP eCLIP11.92□□□□□ -0.5
SLX4-201ENST00000294008 PLCXD3Q63HM9 321 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 TSEN2Q8NCE0 465 aaKnown RBP11.92□□□□□ -0.5
SLX4-201ENST00000294008 SMPDL3AQ92484 453 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 HAS2Q92819 552 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 HHIPQ96QV1 700 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 CD300LBA8K4G0 201 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 WASH4PA8MWX3 477 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 FGF18O76093 207 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 YIF1AO95070 293 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 HSD17B12Q53GQ0 312 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 FCRLBQ6BAA4 426 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 SAMD12Q8N8I0 201 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 SLC5A11Q8WWX8 675 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 RAB9BQ9NP90 201 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 GPR160Q9UJ42 338 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 GJE1A6NN92 205 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 CDK2AP1O14519 115 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 ESR1P03372 595 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 GSTM3P21266 225 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 NDST2P52849 883 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 XYLT1Q86Y38 959 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 ACBD4Q8NC06 268 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 IL31RAQ8NI17 732 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 C15orf40Q8WUR7 153 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 UHRF1Q96T88 793 aaPredicted RBP11.92□□□□□ -0.5
SLX4-201ENST00000294008 CDC6Q99741 560 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 ZNF559Q9BR84 538 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 TFB2MQ9H5Q4 396 aaKnown RBP11.92□□□□□ -0.5
SLX4-201ENST00000294008 MEIS3P2A8K0S8 358 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 RNGTTO60942 597 aaKnown RBP11.92□□□□□ -0.5
SLX4-201ENST00000294008 RBBP9O75884 186 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 ZNF44P15621 663 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 CDK2P24941 298 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 HOXD11P31277 338 aaPredicted RBP11.92□□□□□ -0.5
SLX4-201ENST00000294008 IL10RBQ08334 325 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 HNRNPA0Q13151 305 aaKnown RBP11.92□□□□□ -0.5
SLX4-201ENST00000294008 OR9A2Q8NGT5 310 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 NPIPA5A0A0B4J1W7 369 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 UPK3BL1B0FP48 263 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 UPK3BL2E5RIL1 263 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 NPIPA7E9PJI5 369 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 TUSC2O75896 110 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 GSTP1P09211 210 aaKnown RBP11.92□□□□□ -0.5
SLX4-201ENST00000294008 NPIPA8P0DM63 369 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 ALDH3B2P48448 385 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 ZNF33BQ06732 778 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 CRYZQ08257 329 aaKnown RBP11.92□□□□□ -0.5
SLX4-201ENST00000294008 DUSP28Q4G0W2 176 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 FAM182AQ5T1J6 154 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 FN3KRPQ9HA64 309 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 FAM86C1Q9NVL1 165 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 TEX10Q9NXF1 929 aaPredicted RBP11.92□□□□□ -0.5
SLX4-201ENST00000294008 THUMPD1Q9NXG2 353 aaKnown RBP11.92□□□□□ -0.5
SLX4-201ENST00000294008 SIDT1Q9NXL6 827 aaKnown RBP11.92□□□□□ -0.5
SLX4-201ENST00000294008 FOXO6A8MYZ6 492 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 DUSP11O75319 330 aaKnown RBP11.92□□□□□ -0.5
SLX4-201ENST00000294008 RPL13AP40429 203 aaKnown RBP11.92□□□□□ -0.5
SLX4-201ENST00000294008 CCL11P51671 97 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 LBX1P52954 281 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 YBEYP58557 167 aaPredicted RBP11.92□□□□□ -0.5
SLX4-201ENST00000294008 PTPRRQ15256 657 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 CCL14Q16627 93 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 FBXL18Q96ME1 805 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 MRI1Q9BV20 369 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 KCMF1Q9P0J7 381 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms