RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 SUZ12Q15022 739 aaKnown RBP9.86□□□□□ -0.83
SKA1-201ENST00000285116 OCLNQ16625 522 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 TJAP1Q5JTD0 557 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 FAM205BPQ63HN1 556 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 CTRB2Q6GPI1 263 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 SDE2Q6IQ49 451 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 GDPD4Q6W3E5 623 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 LRRC20Q8TCA0 184 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 DNAJA4Q8WW22 397 aaPredicted RBP9.86□□□□□ -0.83
SKA1-201ENST00000285116 SLC25A46Q96AG3 418 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 PDXPQ96GD0 296 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 DIRAS2Q96HU8 199 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 PKP4Q99569 1192 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 TCF25Q9BQ70 676 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.86□□□□□ -0.83
SKA1-201ENST00000285116 TMEM39AQ9NV64 488 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 NDUFB11Q9NX14 153 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 SH3BP4Q9P0V3 963 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 GULP1Q9UBP9 304 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 REV1Q9UBZ9 1251 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 SLC25A13Q9UJS0 675 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 ACAD8Q9UKU7 415 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 MGAT4BQ9UQ53 548 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 ALG5Q9Y673 324 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 KCNE2Q9Y6J6 123 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 LTBP2Q14767 1821 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 SCN5AQ14524 2016 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 IL1AP01583 271 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 GPC1P35052 558 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 MAP2K3P46734 347 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 RPS13P62277 151 aaKnown RBP9.86□□□□□ -0.83
SKA1-201ENST00000285116 MAB21L1Q13394 359 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 MPEG1Q2M385 716 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 PYDC2Q56P42 97 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 COL13A1Q5TAT6 717 aaPredicted RBP9.86□□□□□ -0.83
SKA1-201ENST00000285116 CD300LDQ6UXZ3 194 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 CLDN22Q8N7P3 220 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 NLGN4YQ8NFZ3 816 aaPredicted RBP9.86□□□□□ -0.83
SKA1-201ENST00000285116 CREB3L4Q8TEY5 395 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 FUZQ9BT04 418 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 WRAP53Q9BUR4 548 aaKnown RBP9.86□□□□□ -0.83
SKA1-201ENST00000285116 HDHD5Q9BXW7 423 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 MIXL1Q9H2W2 232 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 MRPL17Q9NRX2 175 aaKnown RBP9.86□□□□□ -0.83
SKA1-201ENST00000285116 GLTPQ9NZD2 209 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 SSR3Q9UNL2 185 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 PRAMEF33A0A0G2JMD5 474 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 LINC00862A6NCI5 91 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 SNTNA6NMZ2 147 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 A8MX80 341 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 M0R129 80 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 PCDH17O14917 1159 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 HCN1O60741 890 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 PRAMEF10O60809 474 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 ATG13O75143 517 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 PDGFAP04085 211 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 IFNW1P05000 195 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 OSMP13725 252 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 UQCRC2P22695 453 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 AQP1P29972 269 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 PTGS2P35354 604 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 SOX3P41225 446 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 CTSOP43234 321 aaPredicted RBP9.86□□□□□ -0.83
SKA1-201ENST00000285116 DEFB103AP81534 67 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 DOC2BQ14184 412 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 ANGPT1Q15389 498 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.86□□□□□ -0.83
SKA1-201ENST00000285116 FAM109BQ6ICB4 259 aaPredicted RBP9.86□□□□□ -0.83
SKA1-201ENST00000285116 MZT2BQ6NZ67 158 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 HSDL2Q6YN16 418 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 ZNF852Q6ZMS4 543 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 COMMD6Q7Z4G1 85 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 DDX53Q86TM3 631 aaKnown RBP9.86□□□□□ -0.83
SKA1-201ENST00000285116 NRSN1Q8IZ57 195 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 DUSP18Q8NEJ0 188 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 OR9Q2Q8NGE9 314 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 OR9Q1Q8NGQ5 310 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 C16orf78Q8WTQ4 265 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 PPCDCQ96CD2 204 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 HYLS1Q96M11 299 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 TRIM45Q9H8W5 580 aaPredicted RBP9.86□□□□□ -0.83
SKA1-201ENST00000285116 OGDHLQ9ULD0 1010 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 NUP214P35658 2090 aaPredicted RBP9.85□□□□□ -0.83
SKA1-201ENST00000285116 GNG14A0A1W2PPG7 69 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 A0A1W2PQL4 384 aaPredicted RBP9.85□□□□□ -0.83
SKA1-201ENST00000285116 PRRG1O14668 218 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 ZNF197O14709 1029 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 C6orf47O95873 294 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 FHP07954 510 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 GAAP10253 952 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 NAGAP17050 411 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 MLLT11Q13015 90 aaPredicted RBP9.85□□□□□ -0.83
SKA1-201ENST00000285116 SPHARQ15513 63 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 DDI2Q5TDH0 399 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 TXNDC8Q6A555 127 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 KIAA1211LQ6NV74 962 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 ZNF782Q6ZMW2 699 aaPredicted RBP9.85□□□□□ -0.83
SKA1-201ENST00000285116 PTCHD4Q6ZW05 846 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 HSD11B1LQ7Z5J1 315 aa9.85□□□□□ -0.83
SKA1-201ENST00000285116 TECPR1Q7Z6L1 1165 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms