RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 CNBD2Q96M20 576 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 ANKRD60Q9BZ19 345 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 OR51I1Q9H343 314 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 SMPD3Q9NY59 655 aaPredicted RBP20.77■□□□□ 0.92
CCDC7-201ENST00000277657 PADI2Q9Y2J8 665 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 ZNF451Q9Y4E5 1061 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 MAGED1Q9Y5V3 778 aaPredicted RBP20.77■□□□□ 0.92
CCDC7-201ENST00000277657 SPACA6W5XKT8 324 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 PCDH15Q96QU1 1955 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 MUC3AQ02505 3323 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 IGHV5-51A0A0C4DH38 117 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 EIF4E1BA6NMX2 242 aaKnown RBP20.77■□□□□ 0.92
CCDC7-201ENST00000277657 EMC8O43402 210 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 DPM1O60762 260 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 OPN1SWP03999 348 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 GLB1P16278 677 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 ALDH4A1P30038 563 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 CLCN2P51788 898 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 NR1D2Q14995 579 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 PLK5Q496M5 336 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 OTUD3Q5T2D3 398 aaPredicted RBP20.77■□□□□ 0.92
CCDC7-201ENST00000277657 NKAIN2Q5VXU1 208 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 TMEM179BQ7Z7N9 219 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 OR5T3Q8NGG3 340 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 NCSTNQ92542 709 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 TMEM19Q96HH6 336 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 EPB41L1Q9H4G0 881 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 BATF3Q9NR55 127 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 NTMQ9P121 344 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 SUSD2Q9UGT4 822 aa20.77■□□□□ 0.92
CCDC7-201ENST00000277657 IGHV1OR21-1A0A087WYE8 117 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 hCG_2039718K7EN88 272 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 HPRP00739 348 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 BCHEP06276 602 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 MATN1P21941 496 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 MC3RP41968 323 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 GPR3P46089 330 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 CHN2P52757 468 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 PRR5P85299 388 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 CSTF1Q05048 431 aaKnown RBP20.76■□□□□ 0.91
CCDC7-201ENST00000277657 MERTKQ12866 999 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 SZRD1Q7Z422 152 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 C1orf210Q8IVY1 113 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 METTL25Q8N6Q8 603 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 LZICQ8WZA0 190 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 NECAB3Q96P71 396 aaPredicted RBP20.76■□□□□ 0.91
CCDC7-201ENST00000277657 ADI1Q9BV57 179 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 ANKHQ9HCJ1 492 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 VNN3Q9NY84 501 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 PLCL2Q9UPR0 1127 aa20.76■□□□□ 0.91
CCDC7-201ENST00000277657 C5orf58C9J3I9 102 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 SGK494L7N484 410 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 PGM3O95394 542 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 HMGN2P05204 90 aaKnown RBP20.75■□□□□ 0.91
CCDC7-201ENST00000277657 OR12D1P0DN82 309 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 KHKP50053 298 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 ITGA1P56199 1179 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 OR1D5P58170 312 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 GK3PQ14409 553 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 KANSL1Q7Z3B3 1105 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 TSEN54Q7Z6J9 526 aaKnown RBP20.75■□□□□ 0.91
CCDC7-201ENST00000277657 CARFQ8N187 725 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 SDCCAG3Q96C92 435 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 MAGED4Q96JG8 741 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 C3orf14Q9HBI5 128 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 USE1Q9NZ43 259 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 BAG5Q9UL15 447 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 PCDHGB5Q9Y5G0 923 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 CABIN1Q9Y6J0 2220 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 ARID1BQ8NFD5 2236 aaPredicted RBP20.75■□□□□ 0.91
CCDC7-201ENST00000277657 PRAMEF27A3QJZ7 478 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 MLLT3P42568 568 aaPredicted RBP20.75■□□□□ 0.91
CCDC7-201ENST00000277657 ANXA11P50995 505 aaKnown RBP20.75■□□□□ 0.91
CCDC7-201ENST00000277657 PRKAG1P54619 331 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 PPP2R2BQ00005 443 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 LTB4RQ15722 352 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 SLC36A3Q495N2 470 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 IFI44LQ53G44 452 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 SHQ1Q6PI26 577 aaKnown RBP20.75■□□□□ 0.91
CCDC7-201ENST00000277657 HIPK1Q86Z02 1210 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 SHISA5Q8N114 240 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 TMEM52Q8NDY8 209 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 OR5D16Q8NGK9 328 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 OR9A4Q8NGU2 314 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 N4BP2L2Q92802 583 aaPredicted RBP20.75■□□□□ 0.91
CCDC7-201ENST00000277657 OSBPL10Q9BXB5 764 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 PDE7BQ9NP56 450 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 P2RX2Q9UBL9 471 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 RAB23Q9ULC3 237 aa20.75■□□□□ 0.91
CCDC7-201ENST00000277657 PLOD2O00469 737 aa20.74■□□□□ 0.91
CCDC7-201ENST00000277657 E2F6O75461 281 aa20.74■□□□□ 0.91
CCDC7-201ENST00000277657 MED26O95402 600 aa20.74■□□□□ 0.91
CCDC7-201ENST00000277657 ZBTB11O95625 1053 aaPredicted RBP20.74■□□□□ 0.91
CCDC7-201ENST00000277657 CPMP14384 443 aa20.74■□□□□ 0.91
CCDC7-201ENST00000277657 EPHA8P29322 1005 aaPredicted RBP20.74■□□□□ 0.91
CCDC7-201ENST00000277657 PPM1FP49593 454 aaPredicted RBP20.74■□□□□ 0.91
CCDC7-201ENST00000277657 RAB38P57729 211 aa20.74■□□□□ 0.91
CCDC7-201ENST00000277657 SHC2P98077 582 aa20.74■□□□□ 0.91
CCDC7-201ENST00000277657 COL9A2Q14055 689 aaPredicted RBP20.74■□□□□ 0.91
CCDC7-201ENST00000277657 RPS26P11Q5JNZ5 115 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms