RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MAP2K4P45985 399 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 RABIFP47224 123 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 TAS2R43P59537 309 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 DUS1LQ6P1R4 473 aaKnown RBP13.35□□□□□ -0.27
CDH3-201ENST00000264012 PGBD5Q8N414 524 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 OR56A3Q8NH54 315 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 NETO1Q8TDF5 533 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 MYLIPQ8WY64 445 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 POLDIP3Q9BY77 421 aaKnown RBP13.35□□□□□ -0.27
CDH3-201ENST00000264012 MKLN1Q9UL63 735 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 LAMA4Q16363 1823 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 HIDE1A8MVS5 230 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 GPR37L1O60883 481 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 APOL3O95236 402 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 PLGP00747 810 aaPredicted RBP13.35□□□□□ -0.27
CDH3-201ENST00000264012 MT-ND2P03891 347 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 HNRNPKP61978 463 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDH3-201ENST00000264012 CTSL3PQ5NE16 218 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 SPATC1Q76KD6 591 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 GID4Q8IVV7 300 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 NAGSQ8N159 534 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 OR6N1Q8NGY5 312 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 FAM3CQ92520 227 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 HHIPL1Q96JK4 782 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 SLC22A12Q96S37 553 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 PELOQ9BRX2 385 aaKnown RBP13.35□□□□□ -0.27
CDH3-201ENST00000264012 MROH6A6NGR9 719 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 CELP19835 753 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 GABRB3P28472 473 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 MAGEA3P43357 314 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 GCGRP47871 477 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 HLCSP50747 726 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 DCDC1P59894 354 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 SHC2P98077 582 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 HSF2Q03933 536 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 RGNQ15493 299 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 FIGNL1Q6PIW4 674 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 ZNF627Q7L945 461 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 DAZLQ92904 295 aaKnown RBP13.34□□□□□ -0.27
CDH3-201ENST00000264012 APOOQ9BUR5 198 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 PIGUQ9H490 435 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 RBMX2Q9Y388 322 aaKnown RBP13.34□□□□□ -0.27
CDH3-201ENST00000264012 SMIM30A4D0T7 59 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 RBMXL2O75526 392 aaKnown RBP13.34□□□□□ -0.27
CDH3-201ENST00000264012 AK1P00568 194 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 KLKB1P03952 638 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 OR2B6P58173 313 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 MGAT3Q09327 533 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 ZNF761Q86XN6 746 aaPredicted RBP13.34□□□□□ -0.27
CDH3-201ENST00000264012 TMIEQ8NEW7 156 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 RBP7Q96R05 134 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 ACPTQ9BZG2 426 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 CHMP1AQ9HD42 196 aaPredicted RBP13.34□□□□□ -0.27
CDH3-201ENST00000264012 VAPAQ9P0L0 249 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 DNMT3BQ9UBC3 853 aaKnown RBP13.34□□□□□ -0.27
CDH3-201ENST00000264012 PMF1-BGLAPU3KQ54 211 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 SOX30O94993 753 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 RETP07949 1114 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 CKMT1AP12532 417 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 TMBIM6P55061 237 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 SEMA3BQ13214 749 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 ERMAPQ96PL5 475 aaPredicted RBP13.34□□□□□ -0.27
CDH3-201ENST00000264012 TTTY10Q9BZA0 68 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 TMEM181Q9P2C4 612 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 WASH3PC4AMC7 463 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 RNF13O43567 381 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 DRD1P21728 446 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 AOAHP28039 575 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 EIF1AXP47813 144 aaKnown RBP13.34□□□□□ -0.27
CDH3-201ENST00000264012 SLC6A11P48066 632 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 SNTA1Q13424 505 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 LCTLQ6UWM7 567 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 RNF111Q6ZNA4 994 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 TMEM173Q86WV6 379 aaPredicted RBP13.34□□□□□ -0.27
CDH3-201ENST00000264012 TEX26Q8N6G2 289 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 MR1Q95460 341 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 ZNF696Q9H7X3 374 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 DMRT3Q9NQL9 472 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 ARMC1Q9NVT9 282 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 GPR45Q9Y5Y3 372 aa13.34□□□□□ -0.27
CDH3-201ENST00000264012 SLC35F4A4IF30 521 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 UNC119BA6NIH7 251 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 H3BQ06 376 aaPredicted RBP13.33□□□□□ -0.28
CDH3-201ENST00000264012 ZNF217O75362 1048 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 HTR1AP08908 422 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 MRPL3P09001 348 aaKnown RBP13.33□□□□□ -0.28
CDH3-201ENST00000264012 FBLP22087 321 aaKnown RBP13.33□□□□□ -0.28
CDH3-201ENST00000264012 PLGLB1Q02325 96 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 ODF4Q2M2E3 257 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 TTLL10Q6ZVT0 673 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 ZNF367Q7RTV3 350 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 SDR16C5Q8N3Y7 309 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 JAGN1Q8N5M9 183 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 PSD4Q8NDX1 1056 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 TMEM234Q8WY98 164 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 ZFYVE21Q9BQ24 234 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 GRIP1Q9Y3R0 1128 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 CNTRLQ7Z7A1 2325 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 A0A1W2PRG6 482 aa13.33□□□□□ -0.28
CDH3-201ENST00000264012 TRAPPC6AO75865 159 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms