RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 COQ10BQ9H8M1 238 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 NXT1Q9UKK6 140 aaKnown RBP13.26□□□□□ -0.29
CDH1-201ENST00000261769 HEMK1Q9Y5R4 338 aaPredicted RBP13.26□□□□□ -0.29
CDH1-201ENST00000261769 BCORQ6W2J9 1755 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 DOCK2Q92608 1830 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 HTRA2O43464 458 aaPredicted RBP13.26□□□□□ -0.29
CDH1-201ENST00000261769 ZNF28P17035 718 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 CERS1P27544 350 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 CCR5P51681 352 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 SEMA3BQ13214 749 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 CCNIQ14094 377 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 ADNP2Q6IQ32 1131 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 RASSF6Q6ZTQ3 369 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 CHERPQ8IWX8 916 aaKnown RBP13.26□□□□□ -0.29
CDH1-201ENST00000261769 VWA5B2Q8N398 1253 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 ACOT4Q8N9L9 421 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 TMBIM1Q969X1 311 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 MS4A4EQ96PG1 132 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 GPN2Q9H9Y4 310 aaPredicted RBP13.26□□□□□ -0.29
CDH1-201ENST00000261769 TMEM138Q9NPI0 162 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 PRODHO43272 600 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 ZNF208O43345 1280 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 SCRG1O75711 98 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 SDC2P34741 201 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 C6orf52Q5T4I8 152 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 FIGNL1Q6PIW4 674 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 KLHL17Q6TDP4 642 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 FIP1L1Q6UN15 594 aaKnown RBP13.25□□□□□ -0.29
CDH1-201ENST00000261769 THRSPQ92748 146 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 ORAI3Q9BRQ5 295 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 CUTCQ9NTM9 273 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 COMMD9Q9P000 198 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 DDX60LQ5H9U9 1706 aaKnown RBP13.25□□□□□ -0.29
CDH1-201ENST00000261769 RBMXL2O75526 392 aaKnown RBP13.25□□□□□ -0.29
CDH1-201ENST00000261769 FGF4P08620 206 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 KDELR2P33947 212 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 CLCN2P51788 898 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 NR0B1P51843 470 aaKnown RBP13.25□□□□□ -0.29
CDH1-201ENST00000261769 PGGT1BP53609 377 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 KHDC1Q4VXA5 237 aaKnown RBP13.25□□□□□ -0.29
CDH1-201ENST00000261769 UBQLNLQ8IYU4 475 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 OR13H1Q8NG92 308 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 ULBP3Q9BZM4 244 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 FOXQ1Q9C009 403 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 BRD7Q9NPI1 651 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 A0A0G2JPF8 293 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 A0A1W2PQ72 361 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 HNRNPCL3B7ZW38 293 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 H3BNX3 289 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 LINC01565O15544 149 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 AP1G1O43747 822 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 ITGA10O75578 1167 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 HNRNPCL4P0DMR1 293 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 TGFBR2P37173 567 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 ADPRHP54922 357 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 RBPJQ06330 500 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 PTERQ96BW5 349 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 IL4I1Q96RQ9 567 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 DOHHQ9BU89 302 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 POLR2J2Q9GZM3 115 aaKnown RBP13.25□□□□□ -0.29
CDH1-201ENST00000261769 SACM1LQ9NTJ5 587 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 RSL24D1Q9UHA3 163 aaKnown RBP13.25□□□□□ -0.29
CDH1-201ENST00000261769 KCND3Q9UK17 655 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 SGK494L7N484 410 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 NADKO95544 446 aaPredicted RBP13.25□□□□□ -0.29
CDH1-201ENST00000261769 PVRP15151 417 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 HSD11B2P80365 405 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 ADAM15Q13444 863 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 COQ5Q5HYK3 327 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDH1-201ENST00000261769 KBTBD2Q8IY47 623 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 ZSCAN4Q8NAM6 433 aaPredicted RBP13.25□□□□□ -0.29
CDH1-201ENST00000261769 MCFD2Q8NI22 146 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 ECHDC3Q96DC8 303 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 AURKBQ96GD4 344 aaPredicted RBP13.25□□□□□ -0.29
CDH1-201ENST00000261769 NTMT1Q9BV86 223 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 TMEM45AQ9NWC5 275 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 PRSS21Q9Y6M0 314 aa13.25□□□□□ -0.29
CDH1-201ENST00000261769 TTLL8A6PVC2 850 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 EEDO75530 441 aaKnown RBP13.24□□□□□ -0.29
CDH1-201ENST00000261769 ZFAND5O76080 213 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 PEX2P28328 305 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 RAB25P57735 213 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 GPLD1P80108 840 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 OPN5Q6U736 354 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 ZNF551Q7Z340 670 aaPredicted RBP13.24□□□□□ -0.29
CDH1-201ENST00000261769 LTB4R2Q9NPC1 389 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 C1GALT1Q9NS00 363 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 MCUBQ9NWR8 336 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 NAALAD2Q9Y3Q0 740 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 RP1L1Q8IWN7 2480 aaPredicted RBP13.24□□□□□ -0.29
CDH1-201ENST00000261769 CPNE6O95741 557 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 C18orf21Q32NC0 220 aaPredicted RBP13.24□□□□□ -0.29
CDH1-201ENST00000261769 BLOC1S3Q6QNY0 202 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 ENPP6Q6UWR7 440 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 PGBD5Q8N414 524 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 OR52N2Q8NGI0 321 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 TBC1D20Q96BZ9 403 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 TIMMDC1Q9NPL8 285 aa13.24□□□□□ -0.29
CDH1-201ENST00000261769 PCDHB16Q9NRJ7 776 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms