RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 E2F3O00716 465 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 ASGR1P07306 291 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 CXCR4P61073 352 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 MRPS10P82664 201 aaKnown RBP12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 DUSP6Q16828 381 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 PHYKPLQ8IUZ5 450 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 PLD6Q8N2A8 252 aaKnown RBP12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 BBS1Q8NFJ9 593 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 C10orf90Q96M02 699 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 TMEM68Q96MH6 324 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 PTPN18Q99952 460 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 DHRS9Q9BPW9 319 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 VPS25Q9BRG1 176 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 DZANK1Q9NVP4 752 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 LAMP5Q9UJQ1 280 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 K7EPK0 472 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 PPP1R2P9O14990 202 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 FANCGO15287 622 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 SNNO75324 88 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 CMPK1P30085 196 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 PRKAR1BP31321 381 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 KEAP1Q14145 624 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 HMGN3Q15651 99 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 GPR33Q49SQ1 333 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 ZNF585AQ6P3V2 769 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 IDO2Q6ZQW0 420 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 CFAP52Q8N1V2 620 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 FAM71E2Q8N5Q1 922 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 Q8N9G6 341 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 OR10G6Q8NH81 332 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 PAQR8Q8TEZ7 354 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 ZDHHC1Q8WTX9 485 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 CAPNS2Q96L46 248 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 GPATCH2Q9NW75 528 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 FBXW11Q9UKB1 542 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 AJAP1Q9UKB5 411 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 COPS3Q9UNS2 423 aa12.62□□□□□ -0.39
PCDHGA3-201ENST00000253812 SLC22A31A6NKX4 558 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 WASHC1A8K0Z3 465 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 RDH16O75452 317 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 HSD11B1P28845 292 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 C1QTNF8P60827 252 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 TANGO2Q6ICL3 276 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 NRROSQ86YC3 692 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 LACC1Q8IV20 430 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 FAM217AQ8IXS0 508 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 BRI3BPQ8WY22 251 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 CDKN2AIPNLQ96HQ2 116 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 KCNA7Q96RP8 456 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 CDC6Q99741 560 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 CENPOQ9BU64 300 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 AIG1Q9NVV5 245 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 KIAA1522Q9P206 1035 aaPredicted RBP12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 TCHHQ07283 1943 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 DUSP11O75319 330 aaKnown RBP12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 PPP3CBP16298 524 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 RAB6AP20340 208 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 MTNR1AP48039 350 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 TAS2R50P59544 299 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 SPCS2Q15005 226 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 ZNF783Q6ZMS7 281 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 LINC00299Q6ZSB3 139 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 GOLGA7Q7Z5G4 137 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 GPR149Q86SP6 731 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 TRMT10AQ8TBZ6 339 aaKnown RBP12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 OR8D1Q8WZ84 308 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 PARPBPQ9NWS1 579 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 EVLQ9UI08 416 aaPredicted RBP12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 KLHL21Q9UJP4 597 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 PADI3Q9ULW8 664 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 PCDHB14Q9Y5E9 798 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 PSAT1Q9Y617 370 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 AP1M2Q9Y6Q5 423 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 LOC730098B7Z3J9 87 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 CDC7O00311 574 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 ARPC1BO15143 372 aaKnown RBP12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 DNAJB6O75190 326 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 SCGB1D1O95968 90 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 ALDOAP04075 364 aaKnown RBP12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 CAPNS1P04632 268 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 AKR1C4P17516 323 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 M6PRP20645 277 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 CXCR1P25024 350 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 POM121L1PQ3SYA9 428 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 ZNF574Q6ZN55 896 aaPredicted RBP12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 FKBP10Q96AY3 582 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 TMEM248Q9NWD8 314 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 OSER1Q9NX31 292 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 PCDHGA6Q9Y5G7 932 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 TRAV19A0A0A6YYK7 116 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 LOC102723532A0A0G2JNH3 316 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 CLDN24A6NM45 220 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 POM121CA8CG34 1229 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 NPIPA7E9PJI5 369 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 NPIPA8P0DM63 369 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 GM2AP17900 193 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 S1PR1P21453 382 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 VSX2P58304 361 aaPredicted RBP12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 MGAT3Q09327 533 aa12.61□□□□□ -0.39
PCDHGA3-201ENST00000253812 IRF5Q13568 498 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms