RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 MAPRE3Q9UPY8 281 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 EXO1Q9UQ84 846 aaKnown RBP17.99■□□□□ 0.47
SNX4-201ENST00000251775 SH2B3Q9UQQ2 575 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 KIAA1549LQ6ZVL6 1849 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 PRAMEF33A0A0G2JMD5 474 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 PRAMEF10O60809 474 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 ALAS2P22557 587 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 FCHO2Q0JRZ9 810 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 HNRNPA0Q13151 305 aaKnown RBP17.99■□□□□ 0.47
SNX4-201ENST00000251775 MADCAM1Q13477 382 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 GPR19Q15760 415 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 TATDN3Q17R31 274 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 ZNF658BQ4V348 819 aaPredicted RBP17.99■□□□□ 0.47
SNX4-201ENST00000251775 TMPRSS11BQ86T26 416 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 NFKBIDQ8NI38 313 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 ZNF480Q8WV37 535 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 KLHL6Q8WZ60 621 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 TMEM80Q96HE8 168 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 POLR2J2Q9GZM3 115 aaKnown RBP17.99■□□□□ 0.47
SNX4-201ENST00000251775 DNAJC27Q9NZQ0 273 aa17.99■□□□□ 0.47
SNX4-201ENST00000251775 POLR1CO15160 346 aaPredicted RBP17.98■□□□□ 0.47
SNX4-201ENST00000251775 GADD45GO95257 159 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 C1orf105O95561 183 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 FGF19O95750 216 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 LGI1O95970 557 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 ASMTP46597 345 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 TARDBPQ13148 414 aaKnown RBP eCLIP17.98■□□□□ 0.47
SNX4-201ENST00000251775 SCARB2Q14108 478 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 LIPKQ5VXJ0 399 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 PAQR6Q6TCH4 344 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 GLCCI1Q86VQ1 547 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 PHC2Q8IXK0 858 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 VPS37AQ8NEZ2 397 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 OR4A15Q8NGL6 344 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 LRRC3BQ96PB8 259 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 NIPAL2Q9H841 368 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 NMNAT1Q9HAN9 279 aaPredicted RBP17.98■□□□□ 0.47
SNX4-201ENST00000251775 SAGE1Q9NXZ1 904 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 RHCGQ9UBD6 479 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 SNX11Q9Y5W9 270 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 KCNE2Q9Y6J6 123 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 DSPPQ9NZW4 1301 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 FAM227AF5H4B4 570 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 KPNA3O00505 521 aaPredicted RBP17.98■□□□□ 0.47
SNX4-201ENST00000251775 SPINT1O43278 529 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 ARHGEF9O43307 516 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 SOD1P00441 154 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 C1QBP02746 253 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 TSPAN19P0C672 248 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 CISD3P0C7P0 127 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 SNRPD2P62316 118 aaKnown RBP17.98■□□□□ 0.47
SNX4-201ENST00000251775 LEXMQ3ZCV2 418 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 ZNF385BQ569K4 471 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 PYDC2Q56P42 97 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 C12orf40Q86WS4 652 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 NANOGP1Q8N7R0 232 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 LRIG1Q96JA1 1093 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 SLC6A18Q96N87 628 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 FOPNLQ96NB1 174 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 MND1Q9BWT6 205 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 TXNL4BQ9NX01 149 aaKnown RBP17.98■□□□□ 0.47
SNX4-201ENST00000251775 ZNF282Q9UDV7 671 aaPredicted RBP17.98■□□□□ 0.47
SNX4-201ENST00000251775 ALG5Q9Y673 324 aa17.98■□□□□ 0.47
SNX4-201ENST00000251775 TCF20Q9UGU0 1960 aaKnown RBP17.97■□□□□ 0.47
SNX4-201ENST00000251775 TLR4O00206 839 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 IL1AP01583 271 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 TIA1P31483 386 aaKnown RBP eCLIP17.97■□□□□ 0.47
SNX4-201ENST00000251775 FEN1P39748 380 aaKnown RBP17.97■□□□□ 0.47
SNX4-201ENST00000251775 DHCR24Q15392 516 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 BTBD16Q32M84 506 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 TCEAL5Q5H9L2 206 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 MEDAGQ5VYS4 303 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 ZNF770Q6IQ21 691 aaPredicted RBP17.97■□□□□ 0.47
SNX4-201ENST00000251775 WDR53Q7Z5U6 358 aaPredicted RBP17.97■□□□□ 0.47
SNX4-201ENST00000251775 CAMKMTQ7Z624 323 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 CFAP206Q8IYR0 622 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 GEMIN6Q8WXD5 167 aaKnown RBP17.97■□□□□ 0.47
SNX4-201ENST00000251775 PAWRQ96IZ0 340 aaKnown RBP17.97■□□□□ 0.47
SNX4-201ENST00000251775 ZNF717Q9BY31 904 aaPredicted RBP17.97■□□□□ 0.47
SNX4-201ENST00000251775 RACGAP1Q9H0H5 632 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 ATP13A2Q9NQ11 1180 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 GNG14A0A1W2PPG7 69 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 A0A1W2PQ72 361 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 MGAT4DA6NG13 374 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 K7ESM1 405 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 SNRPGP62308 76 aaKnown RBP17.97■□□□□ 0.47
SNX4-201ENST00000251775 TBPL1P62380 186 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 MESP2Q0VG99 397 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 MLLT11Q13015 90 aaPredicted RBP17.97■□□□□ 0.47
SNX4-201ENST00000251775 TSTA3Q13630 321 aaPredicted RBP17.97■□□□□ 0.47
SNX4-201ENST00000251775 NCF4Q15080 339 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 SPIN4Q56A73 249 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 GCNT6Q5T4J0 391 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 ZNF697Q5TEC3 545 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 ANXA8L1Q5VT79 327 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 LAMTOR1Q6IAA8 161 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 MED27Q6P2C8 311 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 PLET1Q6UQ28 207 aa17.97■□□□□ 0.47
SNX4-201ENST00000251775 GRASPQ7Z6J2 395 aaPredicted RBP17.97■□□□□ 0.47
SNX4-201ENST00000251775 CLDN22Q8N7P3 220 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms