RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CAPNS1P04632 268 aa25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 NT5EP21589 574 aa25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 MPIP34949 423 aa25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 WNT3P56703 355 aa25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 HSPB3Q12988 150 aa25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 CEBPEQ15744 281 aa25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 DGAT2L6Q6ZPD8 337 aa25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 ZNF551Q7Z340 670 aaPredicted RBP25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 OR9A2Q8NGT5 310 aa25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 ERP27Q96DN0 273 aa25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 SPDL1Q96EA4 605 aa25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 ZBED6CLQ96FA7 236 aaPredicted RBP25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 AMDHD1Q96NU7 426 aa25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 GLIPR2Q9H4G4 154 aa25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 TMEM45AQ9NWC5 275 aa25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 CROCCQ5TZA2 2017 aa25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 APC2O95996 2303 aa25.49■■□□□ 1.67
CHMP4B-201ENST00000217402 CCDC154A6NI56 674 aa25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 TNNI3P19429 210 aa25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 CAPN3P20807 821 aa25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 VPS26BQ4G0F5 336 aa25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 CPEB2Q7Z5Q1 589 aaKnown RBP25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 CLECL1Q8IZS7 167 aa25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 ADCY4Q8NFM4 1077 aa25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 ADAP2Q9NPF8 381 aa25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 A0A1W2PRB8 838 aa25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 SOCS6O14544 535 aa25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 ATP1B1P05026 303 aa25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 ADSLP30566 484 aaPredicted RBP25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 EIF2S3P41091 472 aaKnown RBP25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 MANFP55145 182 aaKnown RBP25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 KIRREL2Q6UWL6 708 aa25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 RAB43Q86YS6 212 aa25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 TREML1Q86YW5 311 aa25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 PELOQ9BRX2 385 aaKnown RBP25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 FAM120CQ9NX05 1096 aaKnown RBP25.48■■□□□ 1.67
CHMP4B-201ENST00000217402 C17orf105B2RV13 164 aa25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 SLC22A2O15244 555 aa25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 SEC24DO94855 1032 aaPredicted RBP25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 C6orf47O95873 294 aa25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 FRKP42685 505 aaPredicted RBP25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 PGDP52209 483 aa25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 BIKQ13323 160 aa25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 ELAVL1Q15717 326 aaKnown RBP25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 ATP1A1-AS1Q5TC04 95 aa25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 ANXA8L1Q5VT79 327 aa25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 CPZQ66K79 652 aa25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 MRGPREQ86SM8 312 aa25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 NATD1Q8N6N6 113 aa25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 ZFP28Q8NHY6 868 aa25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 RIT1Q92963 219 aa25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 CCNL2Q96S94 520 aaPredicted RBP25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 ACSS1Q9NUB1 689 aaPredicted RBP25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 RAXQ9Y2V3 346 aa25.47■■□□□ 1.67
CHMP4B-201ENST00000217402 LOC102723996A0A087X1L8 192 aa25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 SYNDIG1LA6NDD5 238 aa25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 CFLARO15519 480 aa25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 SCN2BO60939 215 aa25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 ABCB1P08183 1280 aaPredicted RBP25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 SNRPB2P08579 225 aaKnown RBP25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 PRKAR1AP10644 381 aa25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 PAPD4Q6PIY7 484 aaKnown RBP25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 SNX32Q86XE0 403 aa25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 SPACA3Q8IXA5 215 aa25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 GALNT12Q8IXK2 581 aa25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 C7orf57Q8NEG2 295 aa25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 VPS37AQ8NEZ2 397 aa25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 PTPMT1Q8WUK0 201 aaPredicted RBP25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 SLC52A3Q9NQ40 469 aa25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 CLCA3PQ9Y6N3 262 aa25.46■■□□□ 1.67
CHMP4B-201ENST00000217402 LOC100653049A0A140TA62 436 aa25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 PRSS51A0A1B0GVH4 220 aa25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 CDC14CA4D256 554 aa25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 ASPDHA6ND91 283 aa25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 RNASET2O00584 256 aaKnown RBP25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 PCDH17O14917 1159 aa25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 RRP8O43159 456 aaKnown RBP25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 KRT34O76011 436 aa25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 GPC1P35052 558 aa25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 MRPS35P82673 323 aaKnown RBP25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 FITM2Q8N6M3 262 aa25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 POU5F2Q8N7G0 328 aa25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 AMER2Q8N7J2 671 aa25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 OR11G2Q8NGC1 345 aa25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 ADAMTS17Q8TE56 1095 aa25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 KAT2AQ92830 837 aa25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 WDR77Q9BQA1 342 aaPredicted RBP25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 CXorf21Q9HAI6 301 aa25.45■■□□□ 1.67
CHMP4B-201ENST00000217402 IGF2RP11717 2491 aa25.45■■□□□ 1.66
CHMP4B-201ENST00000217402 IGHV1-45A0A0A0MS14 117 aa25.45■■□□□ 1.66
CHMP4B-201ENST00000217402 NKX2-8O15522 239 aa25.45■■□□□ 1.66
CHMP4B-201ENST00000217402 CPSF4O95639 269 aaKnown RBP25.45■■□□□ 1.66
CHMP4B-201ENST00000217402 CT62P0C5K7 136 aa25.45■■□□□ 1.66
CHMP4B-201ENST00000217402 COX6A1P12074 109 aa25.45■■□□□ 1.66
CHMP4B-201ENST00000217402 CDK9P50750 372 aaKnown RBP25.45■■□□□ 1.66
CHMP4B-201ENST00000217402 ATP1A4Q13733 1029 aa25.45■■□□□ 1.66
CHMP4B-201ENST00000217402 PCOLCEQ15113 449 aa25.45■■□□□ 1.66
CHMP4B-201ENST00000217402 MAPRE2Q15555 327 aa25.45■■□□□ 1.66
CHMP4B-201ENST00000217402 MAPKAPK3Q16644 382 aa25.45■■□□□ 1.66
CHMP4B-201ENST00000217402 C6orf163Q5TEZ5 329 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms