RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gm1604bQ3TRG0 118 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Rbbp4Q60972 425 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Gprin3Q8BWS5 763 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Grsf1Q8C5Q4 479 aaKnown RBP21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Mterf1aQ8CHZ9 379 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Agr3Q8R3W7 165 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Olfr1233Q8VGN0 305 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 GlyatQ91XE0 296 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Klk6Q91Y82 253 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Atp6v1c2Q99L60 427 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Rnf138Q9CQE0 245 aaKnown RBP21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Ccdc3Q9D6Y1 273 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 KelQ9EQF2 713 aa21.46■■□□□ 1.03
Scn1b-201ENSMUST00000098548 Vmn2r38G3UYA8 861 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Vmn2r33K7N705 861 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Stxbp1O08599 594 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Syt3O35681 587 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Gabra3P26049 492 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Serpind1P49182 478 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Serpina3mQ03734 418 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Fcho2Q3UQN2 809 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Olfr798Q7TRH8 311 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Khdc3Q9CWU5 440 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Mgme1Q9CXC3 338 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Acbd7Q9D258 88 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Lypd2Q9DD23 127 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Cyp4f14Q9EP75 524 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Nrip2Q9JHR9 270 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Lbx2Q9WUN8 195 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Abca4O35600 2310 aa21.45■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Igkv4-86A0A0G2JGE7 114 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Gm8765B7ZWJ3 1017 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Galntl6E5D8G1 601 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Zfp605E9QAH2 694 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Slc6a6O35316 621 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 DdcO88533 480 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Sh3pxd2aO89032 1124 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Rps15aP62245 130 aaKnown RBP21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Adra1aP97718 466 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Fezf1Q0VDQ9 475 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 PepdQ11136 493 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Gsk3aQ2NL51 490 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Gm906Q3V0M1 1017 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Cpxcr1Q3V0P1 322 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 RflnbQ5SVD0 216 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Prss54Q7M756 383 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Kirrel2Q7TSU7 700 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Zfand1Q8BFR6 268 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 IlvblQ8BU33 632 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Mrpl22Q8BU88 206 aaKnown RBP21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 ExogQ8C163 368 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Ppp1r3bQ8C767 284 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Vps50Q8CI71 964 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Tnfaip8l1Q8K288 186 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Zc3h10Q8R205 435 aaKnown RBP21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Tmem106aQ8VC04 261 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Mospd1Q8VEL0 213 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Pcdhgb2Q91XX7 928 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Pcdhga6Q91XY2 932 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Rps21Q9CQR2 83 aaKnown RBP21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Rnf32Q9JIT1 368 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Slc7a8Q9QXW9 531 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Ehd3Q9QXY6 535 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Opn4Q9QXZ9 521 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Nrf1Q9WU00 503 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Oc90Q9Z0L3 485 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Igkv15-103A0A140T8P3 115 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Cd163l1A0A1B0GSB0 991 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Hs3st4D3YVV6 449 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Ccdc62E9PVD1 701 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Zfp558E9Q1J0 407 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Gm10260F6YVP7 152 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 P01667 111 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 GfapP03995 430 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 AldocP05063 363 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 RcvrnP34057 202 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 ThpoP40226 356 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Tnfsf9P41274 309 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 PhexP70669 749 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Ankdd1bQ14DN9 521 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Kdm4dQ3U2K5 510 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Defb46Q4QY34 57 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 E2f1Q61501 430 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 HltfQ6PCN7 1003 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Olfr1085Q7TR64 313 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Zc3hav1lQ8BFR1 296 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Olfr97Q8VFE1 310 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Olfr330Q8VGD9 315 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Znf639Q99KZ6 485 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Rcc1lQ9CYF5 461 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Tex22Q9D9U4 189 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 PaplnQ9EPX2 1280 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Inpp5eQ9JII1 647 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Fgf21Q9JJN1 210 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 MioxQ9QXN5 285 aa21.44■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Prune2Q52KR3 3084 aa21.43■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Gm13723A0A1L1SUP2 315 aa21.43■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Gm20547B8JJN0 1276 aa21.43■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Znf296E9Q6W4 445 aaKnown RBP21.43■■□□□ 1.02
Scn1b-201ENSMUST00000098548 Fpr-s1O08790 351 aa21.43■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms