RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Gm8122L7N2C7 213 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm17078M0QW51 211 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gja1P23242 382 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 CtnsP57757 367 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Drd2P61168 444 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Sox14Q04892 240 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Bod1Q5SQY2 173 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ckmt2Q6P8J7 419 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Cyp2d40Q6P8N9 338 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Syt16Q7TN83 639 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Slc35d3Q8BGF8 422 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Pou6f2Q8BJI4 691 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Znf322Q8BZ89 410 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Aoc1Q8JZQ5 751 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Vmn1r33Q8R2E0 305 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr854Q8VFF1 315 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Asb15Q8VHS6 583 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ttyh1Q9D3A9 450 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 RtcAQ9D7H3 366 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Prl5a1Q9JII2 230 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Cbll1Q9JIY2 491 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Arl6ip1Q9JKW0 203 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 F2rl3O88634 396 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 BdnfP21237 249 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Id2P41136 134 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Nup43P59235 380 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Hhla1Q3TYV2 514 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Lmf1Q3U3R4 574 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Thoc6Q5U4D9 341 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Cd6Q61003 665 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Elfn2Q68FM6 823 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Eci3Q78JN3 317 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 GalpQ810H5 117 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Coq4Q8BGB8 266 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rnf222Q8CEF8 211 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Scamp1Q8K021 338 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Cyp51a1Q8K0C4 503 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ndc1Q8VCB1 673 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr643Q8VGY1 314 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Mto1Q923Z3 669 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Mrpl49Q9CQ40 166 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Dap3Q9ER88 391 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Il21Q9ES17 146 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 IsxA1A546 240 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Adcyap1r1P70205 496 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rbm12Q8R4X3 992 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Slc22a7Q91WU2 540 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Klhdc8aQ91XA8 350 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Pskh1Q91YA2 424 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Chmp1b2Q9CQD4 199 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 GatmQ9D964 423 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ptges3lQ9D9A7 131 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Amdhd1Q9DBA8 426 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Lman2Q9DBH5 358 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 NplQ9DCJ9 320 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Zfp738B8JJX8 793 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Nfatc3P97305 1075 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 UbqlnlQ14DL0 610 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Snta1Q61234 503 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr871Q7TRF0 311 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Fam181bQ80VF6 417 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Spata7Q80VP2 582 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Echs1Q8BH95 290 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Steap2Q8BWB6 489 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Fem1abQ8C0T1 654 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Prps1l1Q8C5R8 318 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tmem150cQ8C8S3 249 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Trmt6Q8CE96 497 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Esrp2Q8K0G8 717 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 TmieQ8K467 153 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Paip1Q8VE62 400 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Acsl6Q91WC3 697 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Elp2Q91WG4 831 aaKnown RBP9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Sh3bp4Q921I6 962 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Atp6v1g1Q9CR51 118 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 NaxdQ9CZ42 343 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Akr1e2Q9DCT1 301 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tcf7l1Q9Z1J1 584 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Fem1aaQ9Z2G1 654 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm7682A0A0J9YUM1 481 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm21904A8HG57 180 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm21866J3QMH4 180 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tfap2aP34056 437 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rph3aP47708 681 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Actc1P68033 377 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Acta1P68134 377 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 FhP97807 507 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 H2-Eb2Q3UUV9 287 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Hsfy2Q80Y37 392 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Nars2Q8BGV0 477 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Clba1Q8BHN9 321 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Stfa2l1Q8BWM3 103 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Znf276Q8CE64 614 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr617Q8VGA1 318 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr353Q8VGK0 311 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tmem168Q91VX9 697 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Slc25a27Q9D6D0 322 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 2200002D01RikQ9D809 114 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Arr3Q9EQP6 381 aa9.86□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gdf2Q9WV56 428 aa9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms