RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Slc7a6Q8BGK6 515 aa12.09□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Tmsb15lQ8C0W0 80 aa12.09□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Crlf2Q8CII9 359 aa12.09□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Q8R3C1 574 aa12.09□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Sh3glb2Q8R3V5 400 aa12.09□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Olfr599Q8VG01 315 aa12.09□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Olfr380Q8VGT3 311 aa12.09□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Smap1Q91VZ6 440 aa12.09□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Mrpl54Q9CPW3 135 aa12.09□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Fis1Q9CQ92 152 aa12.09□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Tex47Q9D5W8 253 aa12.09□□□□□ -0.47
Rnf4-201ENSMUST00000030992 DynapQ9D7M5 161 aa12.09□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Erp27Q9D8U3 272 aa12.09□□□□□ -0.47
Rnf4-201ENSMUST00000030992 AnkhQ9JHZ2 492 aa12.09□□□□□ -0.47
Rnf4-201ENSMUST00000030992 ReckQ9Z0J1 971 aa12.09□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Gm33543A0A1B0GSI5 81 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Tmem235B1AQL3 211 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 RerglB2RVE2 204 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Arhgap40E9Q6X9 672 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Ephb6O08644 1014 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Slc6a2O55192 617 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 IghgP01863 330 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Bmp6P20722 510 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Serpine1P22777 402 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Ptpn22P29352 802 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Rps26P62855 115 aaKnown RBP12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 TepsinQ3U3N6 573 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Pabpc2Q62029 628 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Nsg1Q62092 185 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Mvb12aQ78HU3 271 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Syt16Q7TN83 639 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Enkd1Q7TSV9 346 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Adgrd1Q80T32 903 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 TxlngQ8BHN1 524 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Gm9881Q8BR56 211 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Cfap20Q8BTU1 193 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Adap2Q8R2V5 381 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Mospd1Q8VEL0 213 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Olfr441Q8VFS5 310 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 NpntQ91V88 561 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Cts3Q91ZD5 332 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Hspa14Q99M31 509 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Zcchc12Q9CZA5 402 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Qrsl1Q9CZN8 525 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Nectin3Q9JLB9 549 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Syt11Q9R0N3 430 aa12.08□□□□□ -0.47
Rnf4-201ENSMUST00000030992 Ccdc163A2AGD7 326 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Wdr76A6PWY4 622 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr59B1ARL3 323 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr1249L7MU51 318 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Vmn1r169L7N275 304 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 ThP24529 498 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gbx2P48031 348 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Fezf1Q0VDQ9 475 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Riiad1Q3KNY5 119 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tmem248Q3TBN1 314 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Pyroxd2Q3U4I7 581 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Map4k2Q61161 821 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 WdcpQ6NV72 663 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Rcbtb1Q6NXM2 531 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tas2r140Q7TQA4 312 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Sra1Q80VJ2 232 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Mon1bQ8BMQ8 553 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Fam69cQ8BQT2 410 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Hus1Q8BQY8 280 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Stx19Q8R1Q0 292 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr1361Q8VFH0 317 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Pcdhga4Q91XY4 930 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ubox5Q925F4 539 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Smarcd2Q99JR8 531 aaKnown RBP12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 MrgprhQ99MT8 321 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Trpd52l3Q9CQ14 231 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Snx20Q9D2Y5 313 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Rnase10Q9D5A9 208 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Natd1Q9DBW3 110 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Nacc2Q9DCM7 586 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Aif1lQ9EQX4 150 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Slc35a2Q9R0M8 390 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ptges3Q9R0Q7 160 aaKnown RBP12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Kcnmb3E9Q7U0 239 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gm44G3UW88 330 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gm17019K7N6W5 255 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Lrrc23O35125 340 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Mtnd2P03893 345 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Hmgn1P18608 96 aaKnown RBP12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Man2a1P27046 1150 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Arntl2Q2VPD4 579 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Usp30Q3UN04 517 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Fam46cQ5SSF7 391 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Fblim1Q71FD7 375 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tex13c3Q810P0 219 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Cstf2Q8BIQ5 580 aaKnown RBP12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 EloaQ8CB77 773 aaKnown RBP12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr551Q8VG23 315 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Spesp1Q9D5A0 399 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 NaaaQ9D7V9 362 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Spata19Q9DAQ9 154 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Med27Q9DB40 311 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Plscr3Q9JIZ9 296 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Socs6Q9JLY0 533 aa12.08□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 46.2 ms