RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Olfr382Q8VF79 312 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 EdaraddQ8VHX2 208 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Slc25a46Q9CQS4 418 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Gm16286Q9CQX6 220 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Rhox2dW4VSN9 191 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Vmn1r10W4VSP8 311 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Cacna1dQ99246 2179 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Olfr631F8VPJ9 319 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Vmn1r16K7N775 303 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 NsmafO35242 920 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 C9P06683 548 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 TstP52196 297 aaKnown RBP15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Hsd17b3P70385 305 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Anxa4P97429 319 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Rab33aP97950 237 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Dennd5aQ6PAL8 1287 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 SynbQ8BI41 618 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Slitrk6Q8C110 840 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Cyp51a1Q8K0C4 503 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Gtf2h3Q8VD76 309 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Olfr315Q8VFG7 309 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Olfr541Q8VGM0 312 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Lrrc49Q91YK0 686 aa15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Q9CWU4 180 aaKnown RBP15.66■□□□□ 0.1
Shh-201ENSMUST00000002708 Slfn3A0A1L1STQ7 640 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Gm597E9Q8J5 896 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Opn1swP51491 346 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Rin3P59729 980 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Rars2Q3U186 578 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Mon1bQ8BMQ8 553 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Rgs7bpQ8BQP9 257 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Tctn1Q8BZ64 593 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 H2afjQ8R1M2 129 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Clec14aQ8VCP9 459 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Dus3lQ91XI1 637 aaKnown RBP15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Cd209aQ91ZX1 238 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Trappc5Q9CQA1 188 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Zfp84Q9D654 559 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Gm29106A0A087WSP8 697 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Gm11758A2BEI6 360 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Gm11757A2BEI8 360 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Gm8127E9Q0P0 100 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Gm8094K7N6U8 211 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Gh1P06880 216 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Abcb1aP21447 1276 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Lrpap1P55302 360 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Satb1Q60611 764 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Gm5416Q6IE28 97 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Myl12aQ6ZWQ9 172 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Tas2r140Q7TQA4 312 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Zik1Q80YP6 463 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Clrn3Q8BHH8 226 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Spon2Q8BMS2 330 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 TrhdeQ8K093 1025 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Olfr811Q8VFI1 319 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Atp5oQ9DB20 213 aaKnown RBP15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 AcoxlQ9DBS4 632 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Olfr630Q9EQQ7 319 aa15.65■□□□□ 0.1
Shh-201ENSMUST00000002708 Lama2Q60675 3118 aaKnown RBP15.64■□□□□ 0.1
Shh-201ENSMUST00000002708 Gm29394H3BIW7 199 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Gbx2P48031 348 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Tia1P52912 386 aaKnown RBP15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Malt1Q2TBA3 832 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Krt76Q3UV17 594 aaKnown RBP15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Ldoc1Q7TPY9 151 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Fam109aQ8BH49 266 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Cxcl16Q8BSU2 246 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Cdkl1Q8CEQ0 352 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Clec4a3Q8JZX6 237 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 McatQ8R3F5 381 aaKnown RBP15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Olfr308Q8VFP2 308 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Olfr1417Q8VGJ6 315 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Olfr1414Q8VGU5 312 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Cts7Q91ZF2 331 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Fads2Q9Z0R9 444 aaKnown RBP15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Lilra6A0A0B4J1F3 663 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Olfr1040A2ARY1 313 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 F2rl3O88634 396 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Cav3P51637 151 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 PtnP63089 168 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 MedagQ14BA6 303 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Gm14226Q3TZL0 686 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Elavl4Q61701 385 aaKnown RBP15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 OgnQ62000 298 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Cramp1Q6PG95 1285 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Ppp2r1bQ7TNP2 601 aaKnown RBP15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 AptxQ7TQC5 342 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Chpt1Q8C025 398 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Oard1Q8R5F3 152 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Clcc1Q99LI2 539 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Fis1Q9CQ92 152 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Creb3l4Q9D2A5 370 aa15.64■□□□□ 0.09
Shh-201ENSMUST00000002708 Catsperg1E9Q355 1151 aa15.63■□□□□ 0.09
Shh-201ENSMUST00000002708 Vmn2r56E9Q4U5 779 aa15.63■□□□□ 0.09
Shh-201ENSMUST00000002708 FurinP23188 793 aa15.63■□□□□ 0.09
Shh-201ENSMUST00000002708 BckdhaP50136 442 aa15.63■□□□□ 0.09
Shh-201ENSMUST00000002708 Clec4a4Q5YIR8 236 aa15.63■□□□□ 0.09
Shh-201ENSMUST00000002708 Nt5eQ61503 576 aa15.63■□□□□ 0.09
Shh-201ENSMUST00000002708 Prrg3Q6PAQ9 231 aa15.63■□□□□ 0.09
Shh-201ENSMUST00000002708 Cxcl3Q6W5C0 100 aa15.63■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms