RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 Q6ZSR9 355 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 RPS19BP1Q86WX3 136 aaKnown RBP20.28■□□□□ 0.84
SCN1B-206ENST00000638536 TMEM132CQ8N3T6 1108 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 SLC2A12Q8TD20 617 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 ZNF721Q8TF20 911 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 DGAT2Q96PD7 388 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 C20orf27Q9GZN8 174 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 WDR41Q9HAD4 459 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 ZDHHC2Q9UIJ5 367 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 MCM8Q9UJA3 840 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 UBR5O95071 2799 aaPredicted RBP20.28■□□□□ 0.84
SCN1B-206ENST00000638536 ZGRF1Q86YA3 2104 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 DYTNA2CJ06 578 aa20.27■□□□□ 0.84
SCN1B-206ENST00000638536 TM9SF1O15321 606 aa20.27■□□□□ 0.84
SCN1B-206ENST00000638536 FGF4P08620 206 aa20.27■□□□□ 0.84
SCN1B-206ENST00000638536 ALOX15P16050 662 aaPredicted RBP20.27■□□□□ 0.84
SCN1B-206ENST00000638536 PTGER1P34995 402 aa20.27■□□□□ 0.84
SCN1B-206ENST00000638536 TAS2R50P59544 299 aa20.27■□□□□ 0.84
SCN1B-206ENST00000638536 OR52E8Q6IFG1 317 aa20.27■□□□□ 0.84
SCN1B-206ENST00000638536 OR1N1Q8NGS0 311 aa20.27■□□□□ 0.84
SCN1B-206ENST00000638536 OR14A16Q8NHC5 309 aa20.27■□□□□ 0.84
SCN1B-206ENST00000638536 DAZLQ92904 295 aaKnown RBP20.27■□□□□ 0.84
SCN1B-206ENST00000638536 TLCD1Q96CP7 247 aa20.27■□□□□ 0.84
SCN1B-206ENST00000638536 VMP1Q96GC9 406 aa20.27■□□□□ 0.84
SCN1B-206ENST00000638536 DEFB126Q9BYW3 111 aa20.27■□□□□ 0.84
SCN1B-206ENST00000638536 TEKT2Q9UIF3 430 aa20.27■□□□□ 0.84
SCN1B-206ENST00000638536 NTNG1Q9Y2I2 539 aa20.27■□□□□ 0.84
SCN1B-206ENST00000638536 TRAF6Q9Y4K3 522 aa20.27■□□□□ 0.84
SCN1B-206ENST00000638536 PCDHGA10Q9Y5H3 936 aa20.27■□□□□ 0.84
SCN1B-206ENST00000638536 IL3P08700 152 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 LINC00032P0C843 101 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 TIA1P31483 386 aaKnown RBP eCLIP20.27■□□□□ 0.83
SCN1B-206ENST00000638536 MLF1P58340 268 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 MAGOHP61326 146 aaKnown RBP20.27■□□□□ 0.83
SCN1B-206ENST00000638536 DUSP2Q05923 314 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 TUBA3CQ13748 450 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 ZNF169Q14929 603 aaPredicted RBP20.27■□□□□ 0.83
SCN1B-206ENST00000638536 INPP5JQ15735 1006 aaPredicted RBP20.27■□□□□ 0.83
SCN1B-206ENST00000638536 IMPG1Q17R60 797 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 SPIN4Q56A73 249 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 SH2D4BQ5SQS7 431 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 GALNT18Q6P9A2 607 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 TUBA3EQ6PEY2 450 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 ST13P4Q8IZP2 240 aaPredicted RBP20.27■□□□□ 0.83
SCN1B-206ENST00000638536 CISD2Q8N5K1 135 aaKnown RBP20.27■□□□□ 0.83
SCN1B-206ENST00000638536 SLC5A8Q8N695 610 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 ANKRD42Q8N9B4 389 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 MORN4Q8NDC4 146 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 C16orf78Q8WTQ4 265 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 ARL8AQ96BM9 186 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 SNRNP40Q96DI7 357 aaKnown RBP20.27■□□□□ 0.83
SCN1B-206ENST00000638536 RBM18Q96H35 190 aaKnown RBP20.27■□□□□ 0.83
SCN1B-206ENST00000638536 SENP5Q96HI0 755 aaPredicted RBP20.27■□□□□ 0.83
SCN1B-206ENST00000638536 SIGLEC12Q96PQ1 595 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 DLGAP4Q9Y2H0 992 aa20.27■□□□□ 0.83
SCN1B-206ENST00000638536 POLR3HQ9Y535 204 aaPredicted RBP20.27■□□□□ 0.83
SCN1B-206ENST00000638536 COL12A1Q99715 3063 aa20.26■□□□□ 0.83
SCN1B-206ENST00000638536 GNG14A0A1W2PPG7 69 aa20.26■□□□□ 0.83
SCN1B-206ENST00000638536 OR5H15A6NDH6 313 aa20.26■□□□□ 0.83
SCN1B-206ENST00000638536 GABRR3A8MPY1 467 aa20.26■□□□□ 0.83
SCN1B-206ENST00000638536 H2AFXP16104 143 aaPredicted RBP20.26■□□□□ 0.83
SCN1B-206ENST00000638536 CD96P40200 585 aa20.26■□□□□ 0.83
SCN1B-206ENST00000638536 WDR4P57081 412 aaKnown RBP20.26■□□□□ 0.83
SCN1B-206ENST00000638536 KIAA0040Q15053 153 aa20.26■□□□□ 0.83
SCN1B-206ENST00000638536 TLR1Q15399 786 aa20.26■□□□□ 0.83
SCN1B-206ENST00000638536 CHI3L2Q15782 390 aa20.26■□□□□ 0.83
SCN1B-206ENST00000638536 SLC48A1Q6P1K1 146 aa20.26■□□□□ 0.83
SCN1B-206ENST00000638536 CPT1CQ8TCG5 803 aa20.26■□□□□ 0.83
SCN1B-206ENST00000638536 RNF32Q9H0A6 362 aa20.26■□□□□ 0.83
SCN1B-206ENST00000638536 SIRT5Q9NXA8 310 aa20.26■□□□□ 0.83
SCN1B-206ENST00000638536 ESPL1Q14674 2120 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 TMEM120BA0PK00 339 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 C1orf226A1L170 272 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 J3QKU1 62 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 ZWINTO95229 277 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 IGKV3-11P04433 115 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 CT62P0C5K7 136 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 ALDH9A1P49189 494 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 XKP51811 444 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 PLIN5Q00G26 463 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 SRSF11Q05519 484 aaKnown RBP20.25■□□□□ 0.83
SCN1B-206ENST00000638536 PRSS53Q2L4Q9 553 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 SPINK14Q6IE38 97 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 CLYBLQ8N0X4 340 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 ARMC10Q8N2F6 343 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 OR4K14Q8NGD5 310 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 TWIST2Q8WVJ9 160 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 HES7Q9BYE0 225 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.25■□□□□ 0.83
SCN1B-206ENST00000638536 GIMAP2Q9UG22 337 aa20.25■□□□□ 0.83
SCN1B-206ENST00000638536 PIP5K1BO14986 540 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 BIRC5O15392 142 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 RSL1D1O76021 490 aaKnown RBP20.24■□□□□ 0.83
SCN1B-206ENST00000638536 ANXA4P09525 319 aaPredicted RBP20.24■□□□□ 0.83
SCN1B-206ENST00000638536 SLC35E2P0CK97 266 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 BGNP21810 368 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 PIK3R1P27986 724 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 SOX18P35713 384 aa20.24■□□□□ 0.83
SCN1B-206ENST00000638536 FEN1P39748 380 aaKnown RBP20.24■□□□□ 0.83
SCN1B-206ENST00000638536 TRA2BP62995 288 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms