RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 KIAA0907Q7Z7F0 614 aaPredicted RBP19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 TRAPPC5Q8IUR0 188 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 LAX1Q8IWV1 398 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 KRT78Q8N1N4 520 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 ASCC1Q8N9N2 400 aaKnown RBP19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 RASSF5Q8WWW0 418 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 ST6GAL2Q96JF0 529 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 ZNF354BQ96LW1 612 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 SORBS1Q9BX66 1292 aaKnown RBP19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 SRRQ9GZT4 340 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 SPHK2Q9NRA0 654 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 ACAD8Q9UKU7 415 aa19.11■□□□□ 0.65
SYNGAP1-227ENST00000638142 KIF26AQ9ULI4 1882 aaPredicted RBP19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 ANKDD1BA6NHY2 528 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 A6NL46 340 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 MYL12BO14950 172 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 MMP20O60882 483 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 SEMA3DO95025 777 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 IGFBP1P08833 259 aaPredicted RBP19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 RFX2P48378 723 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 MANFP55145 182 aaKnown RBP19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 GRIN2CQ14957 1233 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 ZFP69Q49AA0 526 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 SORCS1Q8WY21 1168 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 DTD2Q96FN9 168 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 TRMT61AQ96FX7 289 aaKnown RBP19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 SLAMF7Q9NQ25 335 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 TRPV5Q9NQA5 729 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 DDX28Q9NUL7 540 aaKnown RBP19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 CMAHPQ9Y471 501 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 CYP7B1O75881 506 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 IL7P13232 177 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 KCNJ5P48544 419 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 POM121L1PQ3SYA9 428 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 PRAMEF14Q5SWL7 426 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 PRAMEF13Q5VWM6 474 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 CNKSR3Q6P9H4 555 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 TRMT11Q7Z4G4 463 aaKnown RBP19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 PHC2Q8IXK0 858 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 TCEANCQ8N8B7 351 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 NEDD4LQ96PU5 975 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 SEMA3GQ9NS98 782 aa19.1■□□□□ 0.65
SYNGAP1-227ENST00000638142 CENPXA8MT69 81 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 PDPK1O15530 556 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 CYP17A1P05093 508 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 TRAPPC2P0DI81 140 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 TRAPPC2BP0DI82 140 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 SYN1P17600 705 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 GSTM5P46439 218 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 ALDH6A1Q02252 535 aaKnown RBP19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 CNTN1Q12860 1018 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 LARS2Q15031 903 aaKnown RBP19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 CDK10Q15131 360 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 FAM180BQ6P0A1 224 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 DEF8Q6ZN54 512 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 FAM181AQ8N9Y4 354 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 ZNF607Q96SK3 696 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 FUZQ9BT04 418 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 OR2AG1Q9H205 316 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 ITM2BQ9Y287 266 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 HEPACAM2A8MVW5 462 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 PLPP1O14494 284 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 LGI1O95970 557 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 SOD1P00441 154 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 IL1AP01583 271 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 CCR2P41597 374 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 MAPK12P53778 367 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 BAK1Q16611 211 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 ZMAT1Q5H9K5 638 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 LCTLQ6UWM7 567 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 FAM129CQ86XR2 697 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 GATAD2AQ86YP4 633 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 FAM26EQ8N5C1 309 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 VN1R2Q8NFZ6 395 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 SLC25A46Q96AG3 418 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 COQ10AQ96MF6 247 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 RSPO3Q9BXY4 272 aaPredicted RBP19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 MTG2Q9H4K7 406 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 HCN2Q9UL51 889 aa19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 DIMT1Q9UNQ2 313 aaKnown RBP19.09■□□□□ 0.65
SYNGAP1-227ENST00000638142 SH3BP5O60239 455 aa19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 GUCY1B2O75343 617 aa19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 OPRD1P41143 372 aa19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 RPS5P46782 204 aaKnown RBP19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 MRPS15P82914 257 aaKnown RBP19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 SCN1BQ07699 218 aa19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 TARDBPQ13148 414 aaKnown RBP eCLIP19.08■□□□□ 0.651e-6■■■■□ 23.6
SYNGAP1-227ENST00000638142 LY6G5CQ5SRR4 150 aa19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 SLC25A30Q5SVS4 291 aa19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 PARS2Q7L3T8 475 aaKnown RBP19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 C6orf120Q7Z4R8 191 aa19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 WDR53Q7Z5U6 358 aaPredicted RBP19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 TMCO2Q7Z6W1 182 aaPredicted RBP19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 ADGRF3Q8IZF5 1079 aa19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 SLAIN1Q8ND83 568 aa19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 SIMC1Q8NDZ2 872 aa19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 POLDIP3Q9BY77 421 aaKnown RBP19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 DPEP2Q9H4A9 486 aa19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 MARCH7Q9H992 704 aa19.08■□□□□ 0.65
SYNGAP1-227ENST00000638142 AP3D1O14617 1153 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms