RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 PTGER4P35408 488 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 BCL6P41182 706 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 XCR1P46094 333 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 MRPL19P49406 292 aaKnown RBP11.84□□□□□ -0.51
CTSD-208ENST00000636843 EXT1Q16394 746 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 GSTA3Q16772 222 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 PPP1R3AQ16821 1122 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 MINDY4Q4G0A6 757 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 AGKQ53H12 422 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 CMPK2Q5EBM0 449 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 ACER2Q5QJU3 275 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 OGFOD2Q6N063 350 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 TMEM214Q6NUQ4 689 aaKnown RBP11.84□□□□□ -0.51
CTSD-208ENST00000636843 XKRXQ6PP77 449 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 SBSNQ6UWP8 590 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 LANCL3Q6ZV70 420 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 GPRIN3Q6ZVF9 776 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 UBE2R2Q712K3 238 aaPredicted RBP11.84□□□□□ -0.51
CTSD-208ENST00000636843 SPATA19Q7Z5L4 167 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 MRGPRGQ86SM5 289 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 DDIASQ8IXT1 998 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 M1APQ8TC57 530 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 C3orf30Q96M34 536 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 WDR41Q9HAD4 459 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 ANKHQ9HCJ1 492 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 POMPQ9Y244 141 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 LRRC42Q9Y546 428 aa11.84□□□□□ -0.51
CTSD-208ENST00000636843 APCP25054 2843 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 CPAMD8Q8IZJ3 1885 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 IGHV3-20A0A0C4DH32 117 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 BBIP1A8MTZ0 92 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 PPP6CO00743 305 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 PDE5AO76074 875 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 STATHP02808 62 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 IL1RNP18510 177 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 IL10P22301 178 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 HTR1EP28566 365 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 GRNP28799 593 aaKnown RBP11.83□□□□□ -0.52
CTSD-208ENST00000636843 FOXA1P55317 472 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 SNRPNP63162 240 aaKnown RBP11.83□□□□□ -0.52
CTSD-208ENST00000636843 CSNK1G2P78368 415 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 MEP1AQ16819 746 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 ZNF630Q2M218 657 aaPredicted RBP11.83□□□□□ -0.52
CTSD-208ENST00000636843 MMEL1Q495T6 779 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 KRTCAP3Q53RY4 240 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 CDKL4Q5MAI5 379 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 SULT1C3Q6IMI6 304 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 HACD2Q6Y1H2 254 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 LRRC74BQ6ZQY2 392 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 GK5Q6ZS86 529 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 PRSS41Q7RTY9 318 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 GDF7Q7Z4P5 450 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 ANKRD37Q7Z713 158 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 C17orf64Q86WR6 236 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 TM4SF19Q96DZ7 209 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 RSRC1Q96IZ7 334 aaKnown RBP11.83□□□□□ -0.52
CTSD-208ENST00000636843 CCDC138Q96M89 665 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 HCN3Q9P1Z3 774 aa11.83□□□□□ -0.52
CTSD-208ENST00000636843 PTBP2Q9UKA9 531 aaKnown RBP11.83□□□□□ -0.52
CTSD-208ENST00000636843 ATP6AP2A0A1C7CYW4 349 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 SGK494L7N484 410 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 SLC19A2O60779 497 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 ATP6AP2O75787 350 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 C8GP07360 202 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 IDO1P14902 403 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 ANPEPP15144 967 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 AGAP20933 346 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 GPX3P22352 226 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 GRK3P35626 688 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 TBPL1P62380 186 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 PMP22Q01453 160 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 TUBA3CQ13748 450 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 PIGGQ5H8A4 983 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 FCRLBQ6BAA4 426 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 TUBA3EQ6PEY2 450 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 BEST3Q8N1M1 668 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 MIER2Q8N344 545 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 AMER2Q8N7J2 671 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 MDS2Q8NDY4 140 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 PLPP5Q8NEB5 264 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 THAP3Q8WTV1 239 aaPredicted RBP11.82□□□□□ -0.52
CTSD-208ENST00000636843 TSPEARQ8WU66 669 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 UBTD2Q8WUN7 234 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 SLC13A3Q8WWT9 602 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 TUBGCP3Q96CW5 907 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 PHF12Q96QT6 1004 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 CDRT15Q96T59 188 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 UTP23Q9BRU9 249 aaKnown RBP11.82□□□□□ -0.52
CTSD-208ENST00000636843 TUBB1Q9H4B7 451 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 S100A14Q9HCY8 104 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 MMP25Q9NPA2 562 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 TMEM45AQ9NWC5 275 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 CCDC167Q9P0B6 97 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 SLC22A7Q9Y694 548 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 SCN2AQ99250 2005 aa11.82□□□□□ -0.52
CTSD-208ENST00000636843 CSMD1Q96PZ7 3565 aa11.81□□□□□ -0.52
CTSD-208ENST00000636843 CDK2AP1O14519 115 aa11.81□□□□□ -0.52
CTSD-208ENST00000636843 OTCP00480 354 aa11.81□□□□□ -0.52
CTSD-208ENST00000636843 ENO2P09104 434 aaPredicted RBP11.81□□□□□ -0.52
CTSD-208ENST00000636843 ALDOCP09972 364 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms