RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 LUZP4Q9P127 313 aa6.84□□□□□ -1.31
LINC01108-202ENST00000635227 MARCH4Q9P2E8 410 aaPredicted RBP6.84□□□□□ -1.31
LINC01108-202ENST00000635227 LHX3Q9UBR4 397 aa6.84□□□□□ -1.31
LINC01108-202ENST00000635227 CDH22Q9UJ99 828 aa6.84□□□□□ -1.31
LINC01108-202ENST00000635227 CRYL1Q9Y2S2 319 aa6.84□□□□□ -1.31
LINC01108-202ENST00000635227 L3MBTL1Q9Y468 752 aa6.84□□□□□ -1.31
LINC01108-202ENST00000635227 PLXNA2O75051 1894 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 TENM4Q6N022 2769 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 MEI4A8MW99 385 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 SDHDO14521 159 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 PRMT5O14744 637 aaPredicted RBP6.83□□□□□ -1.32
LINC01108-202ENST00000635227 LIN7AO14910 233 aaPredicted RBP6.83□□□□□ -1.32
LINC01108-202ENST00000635227 RAD51BO15315 384 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 TEX28O15482 410 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 GRID2O43424 1007 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 ENTPD5O75356 428 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 PGLSO95336 258 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 GLUD1P00367 558 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 KLKB1P03952 638 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 ATP6V1C1P21283 382 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 RPS3P23396 243 aaKnown RBP eCLIP6.83□□□□□ -1.32
LINC01108-202ENST00000635227 SP100P23497 879 aaPredicted RBP6.83□□□□□ -1.32
LINC01108-202ENST00000635227 HMGCLP35914 325 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 CPOXP36551 454 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 CSKP41240 450 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 CDKN2DP55273 166 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 ARF5P84085 180 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 XIAPP98170 497 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 TRAF2Q12933 501 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 LCP2Q13094 533 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 DMC1Q14565 340 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 TWIST1Q15672 202 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 AP5B1Q2VPB7 878 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 ACSBG2Q5FVE4 666 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 PPM1LQ5SGD2 360 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 AWAT2Q6E213 333 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 PTRHD1Q6GMV3 140 aaKnown RBP6.83□□□□□ -1.32
LINC01108-202ENST00000635227 PRMT9Q6P2P2 845 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 TAS2R42Q7RTR8 314 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 TMCO2Q7Z6W1 182 aaPredicted RBP6.83□□□□□ -1.32
LINC01108-202ENST00000635227 DEFB107AQ8IZN7 70 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 RBFAQ8N0V3 343 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 FBXW8Q8N3Y1 598 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 RYBPQ8N488 228 aaPredicted RBP6.83□□□□□ -1.32
LINC01108-202ENST00000635227 PCDH20Q8N6Y1 951 aaKnown RBP6.83□□□□□ -1.32
LINC01108-202ENST00000635227 KDM1BQ8NB78 822 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 ACVR1CQ8NER5 493 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 DNAJC9Q8WXX5 260 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 EXT2Q93063 718 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 ULK4Q96C45 1275 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 C19orf60Q96EN9 201 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 CATSPER2Q96P56 530 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 OR52B2Q96RD2 323 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 RAD9AQ99638 391 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 TRIM15Q9C019 465 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 VCXQ9H320 206 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 PNRC2Q9NPJ4 139 aaKnown RBP6.83□□□□□ -1.32
LINC01108-202ENST00000635227 GKN1Q9NS71 199 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 ABCB8Q9NUT2 735 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 UTP6Q9NYH9 597 aaKnown RBP6.83□□□□□ -1.32
LINC01108-202ENST00000635227 TBC1D14Q9P2M4 693 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 SLC7A8Q9UHI5 535 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 ZDHHC2Q9UIJ5 367 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.83□□□□□ -1.32
LINC01108-202ENST00000635227 PIKFYVEQ9Y2I7 2098 aa6.83□□□□□ -1.32
LINC01108-202ENST00000635227 CNOT1A5YKK6 2376 aaKnown RBP6.82□□□□□ -1.32
LINC01108-202ENST00000635227 ABCA12Q86UK0 2595 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 ATG2AQ2TAZ0 1938 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 DSPP15924 2871 aaKnown RBP6.82□□□□□ -1.32
LINC01108-202ENST00000635227 A0A0A0MQY5 61 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 C1orf232A0A0U1RR37 186 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 DYTNA2CJ06 578 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 OR51F1A6NGY5 319 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 PSMD12O00232 456 aaPredicted RBP6.82□□□□□ -1.32
LINC01108-202ENST00000635227 EIF3FO00303 357 aaPredicted RBP6.82□□□□□ -1.32
LINC01108-202ENST00000635227 SLC9A3R1O14745 358 aaPredicted RBP6.82□□□□□ -1.32
LINC01108-202ENST00000635227 AZIN1O14977 448 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 ZBTB14O43829 449 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 ZMPSTE24O75844 475 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 KRT36O76013 467 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 FGF4P08620 206 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 F7P08709 466 aaPredicted RBP6.82□□□□□ -1.32
LINC01108-202ENST00000635227 CNPP09543 421 aaKnown RBP6.82□□□□□ -1.32
LINC01108-202ENST00000635227 PIRTP0C851 137 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 CKMT1AP12532 417 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 ANPEPP15144 967 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 GNAZP19086 355 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 ITGAXP20702 1163 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 DGKAP23743 735 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 FMO4P31512 558 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 ARRB2P32121 409 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 SPAM1P38567 509 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 NNMTP40261 264 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 SGSHP51688 502 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 PLK1P53350 603 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 CLNS1AP54105 237 aaKnown RBP6.82□□□□□ -1.32
LINC01108-202ENST00000635227 MTTPP55157 894 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 PKNOX1P55347 436 aa6.82□□□□□ -1.32
LINC01108-202ENST00000635227 POLR2LP62875 67 aaKnown RBP6.82□□□□□ -1.32
LINC01108-202ENST00000635227 UBE3AQ05086 875 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms