RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ADSSP30520 456 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 PTGER4P35408 488 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 ATP6V1E1P36543 226 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 OPRD1P41143 372 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 CASP3P42574 277 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 PCYT1AP49585 367 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 RGS7P49802 495 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 KHKP50053 298 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 MMP15P51511 669 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 MAPK12P53778 367 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 MFAP3P55082 362 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 MLLT10P55197 1068 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 TPD52P55327 224 aaPredicted RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 SNU13P55769 128 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 PEX3P56589 373 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 UBASH3AP57075 661 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 ST8SIA6P61647 398 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 MAT1AQ00266 395 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 EEF1A2Q05639 463 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 ACTN3Q08043 901 aaPredicted RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 NCBP1Q09161 790 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 MYBPHQ13203 477 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 DMP1Q13316 513 aaPredicted RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 PLD1Q13393 1074 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 TNK1Q13470 666 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 CUL3Q13618 768 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 GTF2H2Q13888 395 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 KARSQ15046 597 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 PON2Q15165 354 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 ITPRIPL2Q3MIP1 535 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 KBTBD12Q3ZCT8 623 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 CFAP221Q4G0U5 840 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 SYT14P1Q58G82 188 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 TCTE1Q5JU00 501 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 C9orf57Q5W0N0 161 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 GTF2H2CQ6P1K8 395 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 ALKBH5Q6P6C2 394 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 RHBDF2Q6PJF5 856 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 GFRALQ6UXV0 394 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 TMEM182Q6ZP80 229 aaPredicted RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 ASB18Q6ZVZ8 466 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 NUP54Q7Z3B4 507 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 TMPRSS11BQ86T26 416 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 PTOV1Q86YD1 416 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 GPALPP1Q8IXQ4 340 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 CMTM8Q8IZV2 173 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 CPSF7Q8N684 471 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 NECAB1Q8N987 351 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 STKLD1Q8NE28 680 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 OR8H1Q8NGG4 311 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 SPATA18Q8TC71 538 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 RNF128Q8TEB7 428 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 C2orf15Q8WU43 125 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 SLC20A1Q8WUM9 679 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 KRT35Q92764 455 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 SNX21Q969T3 373 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 ST6GALNAC6Q969X2 333 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 EXOC4Q96A65 974 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 PDLIM5Q96HC4 596 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 TMEM19Q96HH6 336 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 CABS1Q96KC9 395 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 CNOT6LQ96LI5 555 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 PGLYRP2Q96PD5 576 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 TSPAN18Q96SJ8 248 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 NEURL2Q9BR09 285 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 LLPHQ9BRT6 129 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 EDEM2Q9BV94 578 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 GTPBP2Q9BX10 602 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 VN1R1Q9GZP7 353 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF350Q9GZX5 532 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 POLD4Q9HCU8 107 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 Q9N2K0 584 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 DNAJC4Q9NNZ3 241 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 MID1IP1Q9NPA3 183 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 ACKR4Q9NPB9 350 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 SERINC1Q9NRX5 453 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 GDAP2Q9NXN4 497 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 CNIH4Q9P003 139 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 B3GAT1Q9P2W7 334 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 LRWD1Q9UFC0 647 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 ACAD8Q9UKU7 415 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 ODF2LQ9ULJ1 636 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 NAP1L2Q9ULW6 460 aaPredicted RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 MYO6Q9UM54 1294 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 UBQLN1Q9UMX0 589 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 OR2W1Q9Y3N9 320 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 NEUROG3Q9Y4Z2 214 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 SPIN1Q9Y657 262 aaPredicted RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 PDZD2O15018 2839 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 MYH10P35580 1976 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 PLXNA2O75051 1894 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ADGRG4Q8IZF6 3080 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 USP9YO00507 2555 aaPredicted RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 GON4LQ3T8J9 2241 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 A0A0G2JNG1 304 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 A0A1W2PPK0 400 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 A0A1W2PRV1 198 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 FAM92AA1XBS5 289 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 CTAGE9A4FU28 777 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms