RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 PTGR1Q14914 329 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 IFI44LQ53G44 452 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 SH3D19Q5HYK7 790 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 APOBEC3HQ6NTF7 200 aaKnown RBP6.04□□□□□ -1.44
CDKL5-205ENST00000623535 OSTF1Q92882 214 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 ZCWPW2A0A1B0GU75 182 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 ELOVL7A1L3X0 281 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 ZSCAN5BA6NJL1 495 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 LRRN3E7EW58 273 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 NADKO95544 446 aaPredicted RBP6.04□□□□□ -1.44
CDKL5-205ENST00000623535 PXNP49023 591 aaPredicted RBP6.04□□□□□ -1.44
CDKL5-205ENST00000623535 RGS19P49795 217 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 FMR1Q06787 632 aaKnown RBP eCLIP6.04□□□□□ -1.44
CDKL5-205ENST00000623535 AUHQ13825 339 aaKnown RBP6.04□□□□□ -1.44
CDKL5-205ENST00000623535 LIPNQ5VXI9 398 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 UNC5AQ6ZN44 842 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 CIR1Q86X95 450 aaPredicted RBP6.04□□□□□ -1.44
CDKL5-205ENST00000623535 DCAF4L2Q8NA75 395 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 NFKBIDQ8NI38 313 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 UBTD2Q8WUN7 234 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 LRRN4Q8WUT4 740 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 CHRDQ9H2X0 955 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 PXDNLA1KZ92 1463 aa6.04□□□□□ -1.44
CDKL5-205ENST00000623535 TEX51A0A1B0GUA7 166 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 SPARCP09486 303 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 CSN1S1P47710 185 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 MLLT6P55198 1093 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 CRMP1Q14194 572 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 TMIGD1Q6UXZ0 262 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 ZNF782Q6ZMW2 699 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 OR1J4Q8NGS1 313 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 RBM24Q9BX46 236 aaKnown RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 CPNE5Q9HCH3 593 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 RHBDL2Q9NX52 303 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 PAQR5Q9NXK6 330 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 RRP15Q9Y3B9 282 aaKnown RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 A0A0U1RQF3 1178 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 OR6C6A6NF89 314 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 GJB5O95377 273 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 CCNHP51946 323 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 UBAP2LQ14157 1087 aaKnown RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 BCL2L15Q5TBC7 163 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 C6orf15Q6UXA7 325 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 IL20RBQ6UXL0 311 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 OR6Y1Q8NGX8 325 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 AUTS2Q8WXX7 1259 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 DCUN1D4Q92564 292 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 SNX27Q96L92 541 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 RBM4BQ9BQ04 359 aaKnown RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 RBM4Q9BWF3 364 aaKnown RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 SLC17A9Q9BYT1 436 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 K7EQS6 105 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 SULT2B1O00204 365 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 CILPO75339 1184 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 LEPRP48357 1165 aaKnown RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 SEC24CP53992 1094 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 TARDBPQ13148 414 aaKnown RBP eCLIP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 NEDD8Q15843 81 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 PERM1Q5SV97 790 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 ZNF574Q6ZN55 896 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 OR5B2Q96R09 309 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 SGIP1Q9BQI5 828 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 ADAM19Q9H013 955 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 DCLRE1BQ9H816 532 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 UBE2J1Q9Y385 318 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 HTRA2O43464 458 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 USP12O75317 370 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 FAM163BP0C2L3 166 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 SUB1P53999 127 aaKnown RBP eCLIP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 GDF10P55107 478 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 EIF3IQ13347 325 aaKnown RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 DPYSL3Q14195 570 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 SCGB2B2Q4G0G5 96 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 PPP1R26Q5T8A7 1209 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 FAM131AQ6UXB0 335 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 CPXM2Q8N436 756 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 RBMXL3Q8N7X1 1067 aaKnown RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 EXD3Q8N9H8 876 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 IGDCC4Q8TDY8 1250 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 MAELQ96JY0 434 aaKnown RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 MYRFLQ96LU7 910 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 ZNF597Q96LX8 424 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 RHOJQ9H4E5 214 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 DLC1Q96QB1 1528 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 A0A0B4J203 849 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 CRTAPO75718 401 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 IQCF3P0C7M6 154 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 PRDX3P30048 256 aaKnown RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 CDK6Q00534 326 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 NRG1Q02297 640 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 CDKN3Q16667 212 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 TEX44Q53QW1 395 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 C3orf67Q6ZVT6 689 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 IL31RAQ8NI17 732 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 STT3BQ8TCJ2 826 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 RPL3LQ92901 407 aaKnown RBP6.03□□□□□ -1.44
CDKL5-205ENST00000623535 CEP295NLQ96MC4 621 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 SLC6A5Q9Y345 797 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 SNX10Q9Y5X0 201 aa6.03□□□□□ -1.44
CDKL5-205ENST00000623535 H3BML4 177 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms