RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 FN3KQ9H479 309 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 MARF1Q9Y4F3 1742 aaKnown RBP9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 MAFKO60675 156 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 APOC1P02654 83 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 OR12D1P0DN82 309 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 MAOBP27338 520 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 MAPK3P27361 379 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 UFM1P61960 85 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 SIM1P81133 766 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 BNIP3Q12983 259 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 ZNF829Q3KNS6 432 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 OR2T5Q6IEZ7 315 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 OGFOD2Q6N063 350 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 ANKRD54Q6NXT1 300 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 ZC3H3Q8IXZ2 948 aaKnown RBP9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 OR2T29Q8NH02 315 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 OR8K5Q8NH50 307 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 GAL3ST3Q96A11 431 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 TCEAL4Q96EI5 215 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 TMEM41AQ96HV5 264 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 LRCH3Q96II8 777 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 ALPK1Q96QP1 1244 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 PKP2Q99959 881 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 PDLIM7Q9NR12 457 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 MCTS1Q9ULC4 181 aaKnown RBP9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 ADAMTS5Q9UNA0 930 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 A0A0J9YY10 115 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 SLC22A1O15245 554 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 IFNA21P01568 189 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 ALDOAP04075 364 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 BPIP17213 487 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 GJA4P35212 333 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 CDH11P55287 796 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 HERV-K104P61576 105 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 RPL19P84098 196 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 GRIK2Q13002 908 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 GRIN2CQ14957 1233 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 FAM78AQ5JUQ0 283 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 C3orf33Q6P1S2 294 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 TMEM107Q6UX40 140 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 MFSD6LQ8IWD5 586 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 KLHDC8AQ8IYD2 350 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 GLIS1Q8NBF1 620 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 TRMT10AQ8TBZ6 339 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 SUN5Q8TC36 379 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 FANK1Q8TC84 345 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 FCGR1BQ92637 280 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 MAPKAP1Q9BPZ7 522 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 TTYH2Q9BSA4 534 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 HOXD1Q9GZZ0 328 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 TEX264Q9Y6I9 313 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 AP1M2Q9Y6Q5 423 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 RGPD5Q99666 1765 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 A0A1B0GTW7 788 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 PRAMEF2O60811 474 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 ZNF821O75541 412 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 CSN2P05814 226 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 CD46P15529 392 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 MADCAM1Q13477 382 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 TMEM201Q5SNT2 666 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 TSPAN33Q86UF1 283 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 OR4N5Q8IXE1 308 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 AQP11Q8NBQ7 271 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 OR5T2Q8NGG2 359 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 DDIT4LQ96D03 193 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 ZNF382Q96SR6 550 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 ZNF395Q9H8N7 513 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 ACTR10Q9NZ32 417 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 MSX1P28360 303 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 CDH15P55291 814 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 CDKL1Q00532 357 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 HTR3DQ70Z44 454 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 ASRGL1Q7L266 308 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 LRRTM3Q86VH5 581 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 CPXM2Q8N436 756 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 CANT1Q8WVQ1 401 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 OR52B2Q96RD2 323 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 PAK6Q9NQU5 681 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 CCDC59Q9P031 241 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 COL2A1P02458 1487 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 AFDNP55196 1824 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 HIDE1A8MVS5 230 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 TMEM233B4DJY2 109 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 TOR1BO14657 336 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 PENKP01210 267 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 AFF3P51826 1226 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 SCAPQ12770 1279 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 MSS51Q4VC12 460 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 PKDCCQ504Y2 493 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 OR8S1Q8NH09 359 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 SHKBP1Q8TBC3 707 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 C15orf40Q8WUR7 153 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 DNAJA3Q96EY1 480 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 PGAM5Q96HS1 289 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 HSH2DQ96JZ2 352 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 PCDHB10Q9UN67 800 aa9.36□□□□□ -0.91
CLTCL1-211ENST00000621271 NSG1A0A0A6YYJ2 146 aa9.35□□□□□ -0.91
CLTCL1-211ENST00000621271 GGT3PA6NGU5 568 aa9.35□□□□□ -0.91
CLTCL1-211ENST00000621271 FAM189A1O60320 539 aa9.35□□□□□ -0.91
CLTCL1-211ENST00000621271 PRH1P02810 166 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms