RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 PPP3R2Q96LZ3 170 aa15.12■□□□□ 0.01
CD40-207ENST00000620709 EHD1Q9H4M9 534 aa15.12■□□□□ 0.01
CD40-207ENST00000620709 TEKT2Q9UIF3 430 aa15.12■□□□□ 0.01
CD40-207ENST00000620709 CRYBG3Q68DQ2 2970 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 NOTCH2Q04721 2471 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 SCN2AQ99250 2005 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 A0A1W2PQ72 361 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 WIPF3A6NGB9 483 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 ANKRD65E5RJM6 399 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 PEX11AO75192 247 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 PIK3R1P27986 724 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 PER3P56645 1201 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 KCNK10P57789 538 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 OLR1P78380 273 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 IMPG1Q17R60 797 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 CATSPEREQ5SY80 951 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 FRG2Q64ET8 278 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 RPUSD3Q6P087 351 aaKnown RBP15.11■□□□□ 0.01
CD40-207ENST00000620709 SLCO4C1Q6ZQN7 724 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 Q6ZSR9 355 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 ANKRD37Q7Z713 158 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 FJX1Q86VR8 437 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 TBC1D19Q8N5T2 526 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 OR5T3Q8NGG3 340 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 WDR34Q96EX3 536 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 IMMP1LQ96LU5 166 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 FRG2BQ96QU4 278 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 TAAR6Q96RI8 345 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 HBEGFQ99075 208 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 EFCAB11Q9BUY7 163 aa15.11■□□□□ 0.01
CD40-207ENST00000620709 RRP15Q9Y3B9 282 aaKnown RBP15.11■□□□□ 0.01
CD40-207ENST00000620709 DIDO1Q9BTC0 2240 aaKnown RBP15.1■□□□□ 0.01
CD40-207ENST00000620709 SERTM1A2A2V5 107 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 OR5H15A6NDH6 313 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 H0YIV9 168 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 LSM1O15116 133 aaKnown RBP15.1■□□□□ 0.01
CD40-207ENST00000620709 DNAJC8O75937 253 aaPredicted RBP15.1■□□□□ 0.01
CD40-207ENST00000620709 PDYNP01213 254 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 ALDOCP09972 364 aaKnown RBP15.1■□□□□ 0.01
CD40-207ENST00000620709 CD22P20273 847 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 MNAT1P51948 309 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 ERVK-8P63133 956 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 HERC3Q15034 1050 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 NSDHLQ15738 373 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 GSTA3Q16772 222 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 SMU1Q2TAY7 513 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 SGO1Q5FBB7 561 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 PAGE2BQ5JRK9 111 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 C1QL3Q5VWW1 255 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 KLHL29Q96CT2 875 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 REPS1Q96D71 796 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 LRMDAQ9H2I8 198 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 FARSBQ9NSD9 589 aaKnown RBP15.1■□□□□ 0.01
CD40-207ENST00000620709 GIMAP2Q9UG22 337 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 PCDHGA11Q9Y5H2 935 aa15.1■□□□□ 0.01
CD40-207ENST00000620709 RASAL1O95294 804 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 B3GALT4O96024 378 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 C1GALT1C1LP0DN25 315 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 IDO1P14902 403 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 DCTP40126 519 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 CORO7P57737 925 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 MAD2L1Q13257 205 aaPredicted RBP15.09■□□□□ 0.01
CD40-207ENST00000620709 LAPTM5Q13571 262 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 MAPRE2Q15555 327 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 DEFB134Q4QY38 66 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 SFT2D3Q587I9 215 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 C6orf136Q5SQH8 315 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 C10orf62Q5T681 223 aaPredicted RBP15.09■□□□□ 0.01
CD40-207ENST00000620709 MED27Q6P2C8 311 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 NXPE4Q6UWF7 544 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 GFRALQ6UXV0 394 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 ASRGL1Q7L266 308 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 FNDC5Q8NAU1 212 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 ZNF740Q8NDX6 193 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 SLX1AQ9BQ83 275 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 PELI2Q9HAT8 420 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 ANKRD10Q9NXR5 420 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 CCL27Q9Y4X3 112 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 CPAMD8Q8IZJ3 1885 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 POLEQ07864 2286 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 CELSR2Q9HCU4 2923 aa15.09■□□□□ 0.01
CD40-207ENST00000620709 TRBC2A0A5B9 178 aa15.08■□□□□ 0.01
CD40-207ENST00000620709 PSMD12O00232 456 aaPredicted RBP15.08■□□□□ 0.01
CD40-207ENST00000620709 PRAMEF2O60811 474 aa15.08■□□□□ 0.01
CD40-207ENST00000620709 B4GALT2O60909 372 aa15.08■□□□□ 0.01
CD40-207ENST00000620709 RSL1D1O76021 490 aaKnown RBP15.08■□□□□ 0.01
CD40-207ENST00000620709 ZNF888P0CJ79 500 aaPredicted RBP15.08■□□□□ 0.01
CD40-207ENST00000620709 COX4I1P13073 169 aa15.08■□□□□ 0.01
CD40-207ENST00000620709 HSD3B1P14060 373 aa15.08■□□□□ 0.01
CD40-207ENST00000620709 HSD3B2P26439 372 aa15.08■□□□□ 0.01
CD40-207ENST00000620709 MRPL19P49406 292 aaKnown RBP15.08■□□□□ 0.01
CD40-207ENST00000620709 HMGCS1Q01581 520 aa15.08■□□□□ 0.01
CD40-207ENST00000620709 RGS1Q08116 209 aa15.08■□□□□ 0.01
CD40-207ENST00000620709 CSTF3Q12996 717 aaKnown RBP15.08■□□□□ 0.01
CD40-207ENST00000620709 RBBP5Q15291 538 aaKnown RBP15.08■□□□□ 0.01
CD40-207ENST00000620709 RPS6KA2Q15349 733 aa15.08■□□□□ 0.01
CD40-207ENST00000620709 HIST2H2ACQ16777 129 aaPredicted RBP15.08■□□□□ 0.01
CD40-207ENST00000620709 AP5B1Q2VPB7 878 aa15.08■□□□□ 0.01
CD40-207ENST00000620709 PLAG1Q6DJT9 500 aa15.08■□□□□ 0.01
CD40-207ENST00000620709 HIST2H2AA3Q6FI13 130 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms