RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 ERVK-18Q9QC07 812 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 CA14Q9ULX7 337 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 HS3ST3A1Q9Y663 406 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 ADAMDEC1O15204 470 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 TBX19O60806 448 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 BCAS1O75363 584 aaPredicted RBP18.11■□□□□ 0.49
MMP28-204ENST00000615136 GABARAPO95166 117 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 RAB8AP61006 207 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 SCARB2Q14108 478 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 GPR18Q14330 331 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 NPTX1Q15818 432 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 CTF1Q16619 201 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 NDUFAF5Q5TEU4 345 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 KIAA0895LQ68EN5 471 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 ABHD17CQ6PCB6 329 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 PAQR7Q86WK9 346 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 DRAXINQ8NBI3 349 aaPredicted RBP18.11■□□□□ 0.49
MMP28-204ENST00000615136 GAS2L1Q99501 681 aaPredicted RBP18.11■□□□□ 0.49
MMP28-204ENST00000615136 SARGQ9BW04 601 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 TPSD1Q9BZJ3 242 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 POLMQ9NP87 494 aaPredicted RBP18.11■□□□□ 0.49
MMP28-204ENST00000615136 SLC2A4RGQ9NR83 387 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 TRNAU1APQ9NX07 287 aaKnown RBP18.11■□□□□ 0.49
MMP28-204ENST00000615136 AASSQ9UDR5 926 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 ADAM29Q9UKF5 820 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 LYVE1Q9Y5Y7 322 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 CLPXO76031 633 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 IGLV3-19P01714 112 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 UQCRC2P22695 453 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 FRKP42685 505 aaPredicted RBP18.11■□□□□ 0.49
MMP28-204ENST00000615136 PXNP49023 591 aaPredicted RBP18.11■□□□□ 0.49
MMP28-204ENST00000615136 MANFP55145 182 aaKnown RBP18.11■□□□□ 0.49
MMP28-204ENST00000615136 EIF2B5Q13144 721 aaKnown RBP18.11■□□□□ 0.49
MMP28-204ENST00000615136 TDGQ13569 410 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 SPCS2Q15005 226 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 CYP27C1Q4G0S4 372 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 VN1R4Q7Z5H5 301 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 TTLQ8NG68 377 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 TAMM41Q96BW9 452 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 HRASLS5Q96KN8 279 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 KLHL25Q9H0H3 589 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 RUBCNLQ9H714 662 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 TBC1D23Q9NUY8 699 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 ATG4BQ9Y4P1 393 aa18.11■□□□□ 0.49
MMP28-204ENST00000615136 TMEM265A0A087WTH1 108 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 A0A1W2PS29 197 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 PRAMEF25A6NGN4 478 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 PRAMEF26H0Y7S4 382 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 CERS1P27544 350 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 AHRP35869 848 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 KRT20P35900 424 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 MASP1P48740 699 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 RPP38P78345 283 aaKnown RBP18.1■□□□□ 0.49
MMP28-204ENST00000615136 MVKQ03426 396 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 SLAMF1Q13291 335 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 ZNF750Q32MQ0 723 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 IFI44LQ53G44 452 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 TRIM40Q6P9F5 258 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 ACOT4Q8N9L9 421 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 MFSD9Q8NBP5 474 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 KCT2Q8NC54 265 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 SPPL2AQ8TCT8 520 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 OR5P2Q8WZ92 322 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 RORBQ92753 470 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 OR2A14Q96R47 310 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 SIGLEC11Q96RL6 698 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 ZNF347Q96SE7 839 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 PALMDQ9NP74 551 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 THSD1Q9NS62 852 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 WSB2Q9NYS7 404 aaPredicted RBP18.1■□□□□ 0.49
MMP28-204ENST00000615136 ASB4Q9Y574 426 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 SCN3AQ9NY46 2000 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 A0A1W2PR48 441 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 SOX1O00570 391 aaPredicted RBP18.1■□□□□ 0.49
MMP28-204ENST00000615136 PGRMC2O15173 223 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 PRAMEF10O60809 474 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 WBP4O75554 376 aaKnown RBP18.1■□□□□ 0.49
MMP28-204ENST00000615136 POLR2CP19387 275 aaPredicted RBP18.1■□□□□ 0.49
MMP28-204ENST00000615136 MAGP20916 626 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 HIST1H1TP22492 207 aaPredicted RBP18.1■□□□□ 0.49
MMP28-204ENST00000615136 NDUFS1P28331 727 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 PRIM2P49643 509 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 BMXP51813 675 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 DGKEP52429 567 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 ZNF630Q2M218 657 aaPredicted RBP18.1■□□□□ 0.49
MMP28-204ENST00000615136 TMEM35AQ53FP2 167 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 SYT6Q5T7P8 510 aaPredicted RBP18.1■□□□□ 0.49
MMP28-204ENST00000615136 TNFAIP8L2Q6P589 184 aaPredicted RBP18.1■□□□□ 0.49
MMP28-204ENST00000615136 HORMAD2Q8N7B1 307 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 OR4C15Q8NGM1 316 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 OR10G6Q8NH81 332 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 ORAI3Q9BRQ5 295 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 LMAN1LQ9HAT1 526 aa18.1■□□□□ 0.49
MMP28-204ENST00000615136 WBP11Q9Y2W2 641 aaKnown RBP18.1■□□□□ 0.49
MMP28-204ENST00000615136 TDRD6O60522 2096 aaKnown RBP18.09■□□□□ 0.49
MMP28-204ENST00000615136 hCG_2014768A0A024R1R8 64 aa18.09■□□□□ 0.49
MMP28-204ENST00000615136 PCDHGA12O60330 932 aa18.09■□□□□ 0.49
MMP28-204ENST00000615136 MT-ND2P03891 347 aa18.09■□□□□ 0.49
MMP28-204ENST00000615136 ATP5A1P25705 553 aaKnown RBP18.09■□□□□ 0.49
MMP28-204ENST00000615136 RABIFP47224 123 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms