RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 NXNL2Q5VZ03 156 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 ZNF517Q6ZMY9 492 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 EFL1Q7Z2Z2 1120 aaKnown RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 RAB43Q86YS6 212 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 SLC43A2Q8N370 569 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 FSTL5Q8N475 847 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 TTC29Q8NA56 475 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 STAG3L4Q8TBR4 150 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 TFAP2CQ92754 450 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 CPNE4Q96A23 557 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 CLDN23Q96B33 292 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 C10orf90Q96M02 699 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 ATOH8Q96SQ7 321 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 MIR1-1HGQ9H1L0 117 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 ITM2CQ9NQX7 267 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 HEBP1Q9NRV9 189 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 RUVBL2Q9Y230 463 aaKnown RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 CRYL1Q9Y2S2 319 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 HSPB11Q9Y547 144 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 PRRC2BQ5JSZ5 2229 aaKnown RBP8.4□□□□□ -1.06
VPS11-206ENST00000614944 TEX13CA0A0J9YWL9 993 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 WWP2O00308 870 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 TRIM13O60858 407 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 KLF8O95600 359 aaPredicted RBP8.4□□□□□ -1.06
VPS11-206ENST00000614944 PLATP00750 562 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 S100A8P05109 93 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 MYF6P23409 242 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 AOAHP28039 575 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 RGS4P49798 205 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 GZMKP49863 264 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 CDKN1CP49918 316 aaPredicted RBP8.4□□□□□ -1.06
VPS11-206ENST00000614944 CCR5P51681 352 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 DGKEP52429 567 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 SEC13P55735 322 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 IL2P60568 153 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 IRF9Q00978 393 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 CLN3Q13286 438 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 ZIK1Q3SY52 487 aaPredicted RBP8.4□□□□□ -1.06
VPS11-206ENST00000614944 RAET1GQ6H3X3 334 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 PIWIL4Q7Z3Z4 852 aaKnown RBP8.4□□□□□ -1.06
VPS11-206ENST00000614944 RP9Q8TA86 221 aaKnown RBP8.4□□□□□ -1.06
VPS11-206ENST00000614944 PHF10Q8WUB8 498 aaKnown RBP8.4□□□□□ -1.06
VPS11-206ENST00000614944 ADAMTS14Q8WXS8 1223 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 SLC7A6Q92536 515 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 KLF6Q99612 283 aaPredicted RBP8.4□□□□□ -1.06
VPS11-206ENST00000614944 OPN3Q9H1Y3 402 aaPredicted RBP8.4□□□□□ -1.06
VPS11-206ENST00000614944 DSN1Q9H410 356 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 NIPAL2Q9H841 368 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 SAMHD1Q9Y3Z3 626 aaKnown RBP8.4□□□□□ -1.06
VPS11-206ENST00000614944 MYO7AQ13402 2215 aa8.4□□□□□ -1.06
VPS11-206ENST00000614944 CCL22O00626 93 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 TCAPO15273 167 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 PCDHGA12O60330 932 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 PLGP00747 810 aaPredicted RBP8.4□□□□□ -1.07
VPS11-206ENST00000614944 DNTTP04053 509 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 GP1BAP07359 652 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 QDPRP09417 244 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 TCN1P20061 433 aaPredicted RBP8.4□□□□□ -1.07
VPS11-206ENST00000614944 LAP3P28838 519 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 MAN2A2P49641 1150 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 RPL6Q02878 288 aaKnown RBP8.4□□□□□ -1.07
VPS11-206ENST00000614944 IKZF1Q13422 519 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 UBAP2LQ14157 1087 aaKnown RBP8.4□□□□□ -1.07
VPS11-206ENST00000614944 C11orf88Q6PI97 169 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 ZNF619Q8N2I2 560 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 ZBTB2Q8N680 514 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 AP2M1Q96CW1 435 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 MTG2Q9H4K7 406 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 NUDT4Q9NZJ9 180 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 NCKAP1Q9Y2A7 1128 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 BTBD3Q9Y2F9 522 aa8.4□□□□□ -1.07
VPS11-206ENST00000614944 MID1O15344 667 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 LILRB5O75023 590 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 EIF3GO75821 320 aaKnown RBP eCLIP8.39□□□□□ -1.07
VPS11-206ENST00000614944 SLCO2B1O94956 709 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 ADORA3P0DMS8 318 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 RRASP10301 218 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 CD1EP15812 388 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 CLCNKAP51800 687 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 KIAA1024LP59773 190 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 RPA4Q13156 261 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 FZD5Q13467 585 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 PTPRRQ15256 657 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 NHSL2Q5HYW2 709 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 CATSPEREQ5SY80 951 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 ANKS6Q68DC2 871 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 Q6ZVL8 140 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 FJX1Q86VR8 437 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 DEFB123Q8N688 67 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 DNAJB8Q8NHS0 232 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 USP7Q93009 1102 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 TMCO6Q96DC7 493 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 RIOK2Q9BVS4 552 aaKnown RBP8.39□□□□□ -1.07
VPS11-206ENST00000614944 PRRG3Q9BZD7 231 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 CCDC86Q9H6F5 360 aaKnown RBP8.39□□□□□ -1.07
VPS11-206ENST00000614944 PLSCR2Q9NRY7 297 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 CD300AQ9UGN4 299 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 OARD1Q9Y530 152 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 RECQL5O94762 991 aaPredicted RBP8.39□□□□□ -1.07
VPS11-206ENST00000614944 C8GP07360 202 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms