RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 GAREM1Q9H706 876 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 FGF22Q9HCT0 170 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 SEC14L3Q9UDX4 400 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 MDC1Q14676 2089 aaKnown RBP10.35□□□□□ -0.75
FAM3A-221ENST00000612856 hCG_2039718K7EN88 272 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 AREL1O15033 823 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 B3GALT2O43825 422 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 NME6O75414 186 aaPredicted RBP10.35□□□□□ -0.75
FAM3A-221ENST00000612856 HLA-DQA2P01906 255 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 RRM2P31350 389 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 CCSMST1Q4G0I0 132 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 ZNF57Q68EA5 555 aaPredicted RBP10.35□□□□□ -0.75
FAM3A-221ENST00000612856 PNCKQ6P2M8 343 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 KRT73Q86Y46 540 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 DTD2Q96FN9 168 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 MRGPRX1Q96LB2 322 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 RBM4BQ9BQ04 359 aaKnown RBP10.35□□□□□ -0.75
FAM3A-221ENST00000612856 RBM4Q9BWF3 364 aaKnown RBP10.35□□□□□ -0.75
FAM3A-221ENST00000612856 ATP6V1HQ9UI12 483 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 HS3ST2Q9Y278 367 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 DIDO1Q9BTC0 2240 aaKnown RBP10.35□□□□□ -0.75
FAM3A-221ENST00000612856 MAGEB17A8MXT2 336 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 TMEM150CB9EJG8 249 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 SSX4O60224 188 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 OR6A2O95222 327 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 LATS1O95835 1130 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 C1SP09871 688 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 ATXN1LP0C7T5 689 aaKnown RBP10.35□□□□□ -0.75
FAM3A-221ENST00000612856 STXBP1P61764 594 aaKnown RBP10.35□□□□□ -0.75
FAM3A-221ENST00000612856 HEPACAMQ14CZ8 416 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 TIGD6Q17RP2 521 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 ZC3H14Q6PJT7 736 aaKnown RBP10.35□□□□□ -0.75
FAM3A-221ENST00000612856 FAM217AQ8IXS0 508 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 LSMEM2Q8N112 164 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 KRTCAP2Q8N6L1 136 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 PEX11GQ96HA9 241 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 C3orf30Q96M34 536 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 DCBLD2Q96PD2 775 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 FAM83CQ9BQN1 747 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 ZNF222Q9UK12 451 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 MTCH2Q9Y6C9 303 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 C5orf42Q9H799 3197 aa10.35□□□□□ -0.75
FAM3A-221ENST00000612856 KCNK2O95069 426 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 TSPAN19P0C672 248 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 CD9P21926 228 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 RPL4P36578 427 aaKnown RBP10.34□□□□□ -0.75
FAM3A-221ENST00000612856 PIGAP37287 484 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 PNLIPRP1P54315 467 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 ADAM15Q13444 863 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 IHHQ14623 411 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 LNX2Q8N448 690 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 CHDHQ8NE62 594 aaPredicted RBP10.34□□□□□ -0.75
FAM3A-221ENST00000612856 KBTBD8Q8NFY9 601 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 NELL1Q92832 810 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 REXO5Q96IC2 774 aaKnown RBP10.34□□□□□ -0.75
FAM3A-221ENST00000612856 LGR4Q9BXB1 951 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 SNTG1Q9NSN8 517 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 LRIT1Q9P2V4 623 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 E7EQ34 232 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 OR10H3O60404 316 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 OR7A10O76100 309 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 IGLV3-25P01717 112 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 FHP07954 510 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 CD1DP15813 335 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 GUCA1AP43080 201 aaPredicted RBP10.34□□□□□ -0.75
FAM3A-221ENST00000612856 OR3A3P47888 321 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 AP1S2P56377 157 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 TMC8Q8IU68 726 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 TMEM156Q8N614 296 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 EDAQ92838 391 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 ZUFSPQ96AP4 578 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 SLC22A18Q96BI1 424 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 TXNDC15Q96J42 360 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 CFHR5Q9BXR6 569 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 KCNH6Q9H252 994 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 ATXN7L1Q9ULK2 861 aaPredicted RBP10.34□□□□□ -0.75
FAM3A-221ENST00000612856 POLHQ9Y253 713 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 A0A1W2PRB8 838 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 SLC9B1P1A6NJY1 282 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 LILRB3O75022 631 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 RAP2AP10114 183 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 AVPR1BP47901 424 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 CSTF3Q12996 717 aaKnown RBP10.34□□□□□ -0.75
FAM3A-221ENST00000612856 SUZ12Q15022 739 aaKnown RBP10.34□□□□□ -0.75
FAM3A-221ENST00000612856 TRIQKQ629K1 86 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 VRK3Q8IV63 474 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 RHNO1Q9BSD3 238 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 C3orf14Q9HBI5 128 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 CD93Q9NPY3 652 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 PISDQ9UG56 409 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 SERTAD3Q9UJW9 196 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 SAMHD1Q9Y3Z3 626 aaKnown RBP10.34□□□□□ -0.75
FAM3A-221ENST00000612856 ACACBO00763 2458 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 UNC80Q8N2C7 3258 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 MED13LQ71F56 2210 aa10.34□□□□□ -0.75
FAM3A-221ENST00000612856 CTDSP2O14595 271 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 TP53P04637 393 aaPredicted RBP10.33□□□□□ -0.76
FAM3A-221ENST00000612856 SMAD4Q13485 552 aaKnown RBP10.33□□□□□ -0.76
FAM3A-221ENST00000612856 ZMYND11Q15326 602 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 TMPRSS11AQ6ZMR5 421 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms