RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 CLEC4AQ9UMR7 237 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 WDR37Q9Y2I8 494 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 PCDHGA2Q9Y5H1 932 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 IRAK3Q9Y616 596 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 ZFC3H1O60293 1989 aaKnown RBP8.27□□□□□ -1.09
LIG4-204ENST00000611712 LRRC72A6NJI9 287 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 ZNF821O75541 412 aaPredicted RBP8.27□□□□□ -1.09
LIG4-204ENST00000611712 EPCAMP16422 314 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 RPL4P36578 427 aaKnown RBP8.27□□□□□ -1.09
LIG4-204ENST00000611712 LIPAP38571 399 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 ST3GAL3Q11203 375 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 ZNHIT3Q15649 155 aaPredicted RBP8.27□□□□□ -1.09
LIG4-204ENST00000611712 GPR68Q15743 365 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 PLAG1Q6DJT9 500 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 DUS1LQ6P1R4 473 aaKnown RBP8.27□□□□□ -1.09
LIG4-204ENST00000611712 ZNF517Q6ZMY9 492 aaPredicted RBP8.27□□□□□ -1.09
LIG4-204ENST00000611712 VN1R5Q7Z5H4 357 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 CALHM3Q86XJ0 350 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 ZNF655Q8N720 491 aaPredicted RBP8.27□□□□□ -1.09
LIG4-204ENST00000611712 ITPKCQ96DU7 683 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 SPRTNQ9H040 489 aaPredicted RBP8.27□□□□□ -1.09
LIG4-204ENST00000611712 SRMSQ9H3Y6 488 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 SMURF1Q9HCE7 757 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 SLC52A3Q9NQ40 469 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 SPATA6Q9NWH7 488 aaPredicted RBP8.27□□□□□ -1.09
LIG4-204ENST00000611712 PCDHGB6Q9Y5F9 930 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 PLXNA1Q9UIW2 1896 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 NUMA1Q14980 2115 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 DUXAA6NLW8 204 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 GAPDHSO14556 408 aaPredicted RBP8.27□□□□□ -1.09
LIG4-204ENST00000611712 ENTPD6O75354 484 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 RASGRP1O95267 797 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 RAB36O95755 333 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 FURINP09958 794 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 NPPBP16860 134 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 DDCP20711 480 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 S100A1P23297 94 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 PTGER1P34995 402 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 DCDC1P59894 354 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 ARMCX6Q7L4S7 300 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 PTOV1Q86YD1 416 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 MARCH9Q86YJ5 346 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 SYNPOQ8N3V7 929 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 OR10H4Q8NGA5 316 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 OR4E2Q8NGC2 313 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 OR56A1Q8NGH5 318 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.27□□□□□ -1.09
LIG4-204ENST00000611712 TRIM63Q969Q1 353 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 TMED9Q9BVK6 235 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 SLC22A4Q9H015 551 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 TAS2R16Q9NYV7 291 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 STOML2Q9UJZ1 356 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 PADI2Q9Y2J8 665 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 OR1A2Q9Y585 309 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 AP1M2Q9Y6Q5 423 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 PRAMEF33A0A0G2JMD5 474 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 HIDE1A8MVS5 230 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 WASH3PC4AMC7 463 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 GFRA2O00451 464 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 PRAMEF10O60809 474 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 ETHE1O95571 254 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 OXSR1O95747 527 aaPredicted RBP8.26□□□□□ -1.09
LIG4-204ENST00000611712 PTHP01270 115 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 CSF2P04141 144 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 ARAFP10398 606 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 SOX3P41225 446 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 NDUFA5Q16718 116 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 MEDAGQ5VYS4 303 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 C22orf42Q6IC83 251 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 SLC27A4Q6P1M0 643 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 PNCKQ6P2M8 343 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 ZNF438Q7Z4V0 828 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 SLC9B2Q86UD5 537 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 RANBP3LQ86VV4 465 aaPredicted RBP8.26□□□□□ -1.09
LIG4-204ENST00000611712 FAM20CQ8IXL6 584 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 METTL4Q8N3J2 472 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 OR8K5Q8NH50 307 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 MRPL48Q96GC5 212 aaKnown RBP8.26□□□□□ -1.09
LIG4-204ENST00000611712 LMLNQ96KR4 655 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 GFM1Q96RP9 751 aaKnown RBP8.26□□□□□ -1.09
LIG4-204ENST00000611712 CPNE5Q9HCH3 593 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 RPRD1BQ9NQG5 326 aaKnown RBP8.26□□□□□ -1.09
LIG4-204ENST00000611712 RLIMQ9NVW2 624 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 ZSCAN32Q9NX65 697 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 ACSL5Q9ULC5 683 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 PCDHGA6Q9Y5G7 932 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 MYO10Q9HD67 2058 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 FOXE1O00358 373 aaPredicted RBP8.26□□□□□ -1.09
LIG4-204ENST00000611712 PGRMC2O15173 223 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 ADORA3P0DMS8 318 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 CHMP24386 653 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 ACTR1BP42025 376 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 ARL4DP49703 201 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 NKX2-5P52952 324 aaPredicted RBP8.26□□□□□ -1.09
LIG4-204ENST00000611712 ACTR1AP61163 376 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 STX4Q12846 297 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 HENMT1Q5T8I9 393 aaKnown RBP8.26□□□□□ -1.09
LIG4-204ENST00000611712 NDUFAF5Q5TEU4 345 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 LHFPL3Q86UP9 236 aa8.26□□□□□ -1.09
LIG4-204ENST00000611712 HORMAD2Q8N7B1 307 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms