RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 OR10G3Q8NGC4 313 aa16.08■□□□□ 0.16
RETREG3-212ENST00000593251 TSPAN17Q96FV3 270 aa16.08■□□□□ 0.16
RETREG3-212ENST00000593251 GAL3ST4Q96RP7 486 aa16.08■□□□□ 0.16
RETREG3-212ENST00000593251 CD244Q9BZW8 370 aa16.08■□□□□ 0.16
RETREG3-212ENST00000593251 RPF2Q9H7B2 306 aaKnown RBP16.08■□□□□ 0.16
RETREG3-212ENST00000593251 ZFP64Q9NPA5 681 aa16.08■□□□□ 0.16
RETREG3-212ENST00000593251 RASSF1Q9NS23 344 aa16.08■□□□□ 0.16
RETREG3-212ENST00000593251 B4GALT7Q9UBV7 327 aa16.08■□□□□ 0.16
RETREG3-212ENST00000593251 RNF112Q9ULX5 631 aa16.08■□□□□ 0.16
RETREG3-212ENST00000593251 BOKQ9UMX3 212 aaPredicted RBP16.08■□□□□ 0.16
RETREG3-212ENST00000593251 ANKHD1Q8IWZ3 2542 aaKnown RBP16.08■□□□□ 0.16
RETREG3-212ENST00000593251 FAM221AA4D161 298 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 SCELO95171 688 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 BMP5P22003 454 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 SSTR1P30872 391 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 ATP6V0D1P61421 351 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 HERVK_113P63132 956 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 ERVK-8P63133 956 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 DDX39BQ13838 428 aaKnown RBP16.07■□□□□ 0.16
RETREG3-212ENST00000593251 TBCCQ15814 346 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 TMEM35AQ53FP2 167 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 CDKL4Q5MAI5 379 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 KHDRBS2Q5VWX1 349 aaKnown RBP16.07■□□□□ 0.16
RETREG3-212ENST00000593251 C18orf63Q68DL7 685 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 OR4C11Q6IEV9 310 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 MED27Q6P2C8 311 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 CHSY3Q70JA7 882 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 LRRC25Q8N386 305 aaPredicted RBP16.07■□□□□ 0.16
RETREG3-212ENST00000593251 FBXW8Q8N3Y1 598 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 LIX1Q8N485 282 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 TNIP2Q8NFZ5 429 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 NEIL3Q8TAT5 605 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 RMND5BQ96G75 393 aaPredicted RBP16.07■□□□□ 0.16
RETREG3-212ENST00000593251 RBM18Q96H35 190 aaKnown RBP16.07■□□□□ 0.16
RETREG3-212ENST00000593251 ERVK-6Q9BXR3 956 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 GSX1Q9H4S2 264 aaPredicted RBP16.07■□□□□ 0.16
RETREG3-212ENST00000593251 ERVK-19Q9WJR5 959 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 CHCHD2Q9Y6H1 151 aaPredicted RBP16.07■□□□□ 0.16
RETREG3-212ENST00000593251 VPS13CQ709C8 3753 aa16.07■□□□□ 0.16
RETREG3-212ENST00000593251 WASHC1A8K0Z3 465 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 HSPB2A8KAH6 182 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 EFCAB8A8MWE9 144 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 FAM47E-STBD1D6RA91 191 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 PROM1O43490 865 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 ALOX15P16050 662 aaPredicted RBP16.06■□□□□ 0.16
RETREG3-212ENST00000593251 STMN1P16949 149 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 TCP1P17987 556 aaKnown RBP16.06■□□□□ 0.16
RETREG3-212ENST00000593251 DNASE1P24855 282 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 CASP2P42575 452 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 RPL21P46778 160 aaKnown RBP16.06■□□□□ 0.16
RETREG3-212ENST00000593251 HNRNPH2P55795 449 aaKnown RBP16.06■□□□□ 0.16
RETREG3-212ENST00000593251 PLIN5Q00G26 463 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 FOXD4Q12950 439 aaPredicted RBP16.06■□□□□ 0.16
RETREG3-212ENST00000593251 E2F2Q14209 437 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 ZNF267Q14586 743 aaPredicted RBP16.06■□□□□ 0.16
RETREG3-212ENST00000593251 HSPB2Q16082 182 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 TMEM64Q6YI46 380 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 LRRC70Q7Z2Q7 622 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 CDC20BQ86Y33 519 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 LAS2Q8IYD9 372 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 OR7G3Q8NG95 312 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 CMTM7Q96FZ5 175 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 FBXL20Q96IG2 436 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 GPR22Q99680 433 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 RBBP8Q99708 897 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 SH3GL2Q99962 352 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 ALG9Q9H6U8 611 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 DMRT3Q9NQL9 472 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 CNOT11Q9UKZ1 510 aaKnown RBP16.06■□□□□ 0.16
RETREG3-212ENST00000593251 SNX24Q9Y343 169 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 DOCK7Q96N67 2140 aa16.06■□□□□ 0.16
RETREG3-212ENST00000593251 C15orf38-AP3S2A0A0A6YYH1 394 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 A6NNC1 897 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 SYT5O00445 386 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 DYRK3O43781 588 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 FBXO45P0C2W1 286 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 GDF1P27539 372 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 RAP1GDS1P52306 607 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 MRPS25P82663 173 aaKnown RBP16.05■□□□□ 0.16
RETREG3-212ENST00000593251 TNFRSF17Q02223 184 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 DUSP8Q13202 625 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 FLYWCH1Q4VC44 716 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 DEPDC1Q5TB30 811 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 RNF111Q6ZNA4 994 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 SLC29A4Q7RTT9 530 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 GPR180Q86V85 440 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 CREG2Q8IUH2 290 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 MMP21Q8N119 569 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 SLC15A4Q8N697 577 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 GOT1L1Q8NHS2 421 aaPredicted RBP16.05■□□□□ 0.16
RETREG3-212ENST00000593251 UBE2E3Q969T4 207 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 ART5Q96L15 291 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 UBXN10Q96LJ8 280 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 DOHHQ9BU89 302 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 WWTR1Q9GZV5 400 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 ACKR4Q9NPB9 350 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 CNIH4Q9P003 139 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 TXNDC16Q9P2K2 825 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 CBLCQ9ULV8 474 aa16.05■□□□□ 0.16
RETREG3-212ENST00000593251 FLNAP21333 2647 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms