RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 MFSD2BA6NFX1 497 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 TLX2O43763 284 aaPredicted RBP14.46□□□□□ -0.09
CIRBP-228ENST00000590347 HCN1O60741 890 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 TRIM3O75382 744 aaPredicted RBP14.46□□□□□ -0.09
CIRBP-228ENST00000590347 DHFRP00374 187 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 PDYNP01213 254 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 ANKRD34CP0C6C1 535 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 F8A1P23610 371 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 ATP12AP54707 1039 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 COX10Q12887 443 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 OPCMLQ14982 345 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 SF3A2Q15428 464 aaKnown RBP14.46□□□□□ -0.09
CIRBP-228ENST00000590347 MPEG1Q2M385 716 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 HSD17B12Q53GQ0 312 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 RAET1GQ6H3X3 334 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 LHFPL3Q86UP9 236 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 ZNF687Q8N1G0 1237 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 C9orf43Q8TAL5 461 aaPredicted RBP14.46□□□□□ -0.09
CIRBP-228ENST00000590347 ELAC1Q9H777 363 aaKnown RBP14.46□□□□□ -0.09
CIRBP-228ENST00000590347 NDUFB11Q9NX14 153 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 SESN1Q9Y6P5 492 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 DNASE2O00115 360 aaPredicted RBP14.46□□□□□ -0.09
CIRBP-228ENST00000590347 FFAR2O15552 330 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 BPIP17213 487 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 SCNN1AP37088 669 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 FNTBP49356 437 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 STK19P49842 368 aaPredicted RBP14.46□□□□□ -0.09
CIRBP-228ENST00000590347 AKR1C2P52895 323 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 AKR1C1Q04828 323 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 LRRC74AQ0VAA2 488 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 CTSL3PQ5NE16 218 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 ZNF852Q6ZMS4 543 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 ADGRF3Q8IZF5 1079 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 OR2T4Q8NH00 348 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 SELENOMQ8WWX9 145 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 ZFP3Q96NJ6 502 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 ACTR10Q9NZ32 417 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 ACSL5Q9ULC5 683 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 LIPT1Q9Y234 373 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 GPR52Q9Y2T5 361 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 FKBP7Q9Y680 259 aa14.46□□□□□ -0.09
CIRBP-228ENST00000590347 MYADML2A6NDP7 307 aa14.46□□□□□ -0.1
CIRBP-228ENST00000590347 GRXCR2A6NFK2 248 aa14.46□□□□□ -0.1
CIRBP-228ENST00000590347 MAGEB17A8MXT2 336 aa14.46□□□□□ -0.1
CIRBP-228ENST00000590347 TLR4O00206 839 aa14.46□□□□□ -0.1
CIRBP-228ENST00000590347 OTCP00480 354 aa14.46□□□□□ -0.1
CIRBP-228ENST00000590347 SDC1P18827 310 aa14.46□□□□□ -0.1
CIRBP-228ENST00000590347 LSM11P83369 360 aaKnown RBP eCLIP14.46□□□□□ -0.14e-13■■□□□ 14.1
CIRBP-228ENST00000590347 SDHAF4Q5VUM1 108 aa14.46□□□□□ -0.1
CIRBP-228ENST00000590347 USP45Q70EL2 814 aa14.46□□□□□ -0.1
CIRBP-228ENST00000590347 CLRN3Q8NCR9 226 aa14.46□□□□□ -0.1
CIRBP-228ENST00000590347 GTF3C2Q8WUA4 911 aaPredicted RBP14.46□□□□□ -0.1
CIRBP-228ENST00000590347 GPR63Q9BZJ6 419 aa14.46□□□□□ -0.1
CIRBP-228ENST00000590347 LDAHQ9H6V9 325 aa14.46□□□□□ -0.1
CIRBP-228ENST00000590347 CTPS2Q9NRF8 586 aa14.46□□□□□ -0.1
CIRBP-228ENST00000590347 PLCL2Q9UPR0 1127 aa14.46□□□□□ -0.1
CIRBP-228ENST00000590347 POFUT2Q9Y2G5 429 aa14.46□□□□□ -0.1
CIRBP-228ENST00000590347 PLXNA1Q9UIW2 1896 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 GPR171O14626 319 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 TAPBPO15533 448 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 MT-ND4P03905 459 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 ETFAP13804 333 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 PKMP14618 531 aaKnown RBP14.45□□□□□ -0.1
CIRBP-228ENST00000590347 FOSL1P15407 271 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 MAPK1P28482 360 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 ACVRL1P37023 503 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 KIR3DL1P43629 444 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 SUOXP51687 545 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 COX20Q5RI15 118 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 ZNF613Q6PF04 617 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 ESPNLQ6ZVH7 1005 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 LAPTM4BQ86VI4 370 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 TRIM69Q86WT6 500 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 LURAP1LQ8IV03 231 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 LINC01465Q8N7H1 131 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 FAM46DQ8NEK8 389 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 OR5AK3PQ8NH89 298 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 GCDHQ92947 438 aaPredicted RBP14.45□□□□□ -0.1
CIRBP-228ENST00000590347 ACTR6Q9GZN1 396 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 MCOLN1Q9GZU1 580 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 TPT1P8Q9HAU6 139 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 DLL4Q9NR61 685 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 SIP14410 1827 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 SMIM28A0A1B0GU29 152 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 TMEM229AB2RXF0 380 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 SEMG1P04279 462 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 MAOBP27338 520 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 RPL34P49207 117 aaKnown RBP14.45□□□□□ -0.1
CIRBP-228ENST00000590347 EVX1P49640 407 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 LILRA4P59901 499 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 C1DQ13901 141 aaKnown RBP14.45□□□□□ -0.1
CIRBP-228ENST00000590347 LTB4RQ15722 352 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 LYPD4Q6UWN0 246 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 TMEM107Q6UX40 140 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 MARCH9Q86YJ5 346 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 C11orf24Q96F05 449 aaPredicted RBP14.45□□□□□ -0.1
CIRBP-228ENST00000590347 LRRC46Q96FV0 321 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 EPYCQ99645 322 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 NLNQ9BYT8 704 aa14.45□□□□□ -0.1
CIRBP-228ENST00000590347 FOLH1BQ9HBA9 442 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms