RNA–Protein interactions for RNA: ENST00000583085.1

STRADA-222, Transcript of STE20-related kinase adaptor alpha, human

Gene STRADA, Length 3,685 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-222	ENST00000583085	FEN1	P39748	380 aa	Known RBP	11.51	□□□□□ -0.57
STRADA-222	ENST00000583085	CCT3	P49368	545 aa	Known RBP	11.51	□□□□□ -0.57
STRADA-222	ENST00000583085	RBBP4	Q09028	425 aa		11.51	□□□□□ -0.57
STRADA-222	ENST00000583085	BNIP3	Q12983	259 aa		11.51	□□□□□ -0.57
STRADA-222	ENST00000583085	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.51	□□□□□ -0.57
STRADA-222	ENST00000583085	NPTX1	Q15818	432 aa		11.51	□□□□□ -0.57
STRADA-222	ENST00000583085	PUS10	Q3MIT2	529 aa	Known RBP	11.51	□□□□□ -0.57
STRADA-222	ENST00000583085	ENTHD1	Q8IYW4	607 aa		11.51	□□□□□ -0.57
STRADA-222	ENST00000583085	GPR32P1	Q8NGA4	272 aa		11.51	□□□□□ -0.57
STRADA-222	ENST00000583085	LZIC	Q8WZA0	190 aa		11.51	□□□□□ -0.57
STRADA-222	ENST00000583085	COL6A3	P12111	3177 aa		11.51	□□□□□ -0.57
STRADA-222	ENST00000583085	DMD	P11532	3685 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	GPC1	P35052	558 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	MVK	Q03426	396 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	DGCR6	Q14129	220 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	KEAP1	Q14145	624 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	ZNF542P	Q5EBM4	170 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	TOR1AIP1	Q5JTV8	583 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	C6orf183	Q5T699	404 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	TMEM236	Q5W0B7	351 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	REEP3	Q6NUK4	255 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	CCDC116	Q8IYX3	515 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	ZNF540	Q8NDQ6	660 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	OR4D11	Q8NGI4	311 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	OR4C15	Q8NGM1	316 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	XAGE5	Q8WWM1	108 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	LCN9	Q8WX39	176 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	POP5	Q969H6	163 aa	Known RBP	11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	OR2M4	Q96R27	311 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	RAD21L1	Q9H4I0	556 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	ACER3	Q9NUN7	267 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	APOBEC3B	Q9UH17	382 aa	Known RBP	11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	ANGPT4	Q9Y264	503 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	C5orf58	C9J3I9	102 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	CLEC3A	O75596	197 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	RASGRP1	O95267	797 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	FADS2	O95864	444 aa	Known RBP	11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	HOXB6	P17509	224 aa	Known RBP	11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	ACTR1B	P42025	376 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	IDH2	P48735	452 aa	Known RBP	11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	NCBP2	P52298	156 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	ACTR1A	P61163	376 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	RAB30	Q15771	203 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	AHSA2	Q719I0	299 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	WDR53	Q7Z5U6	358 aa	Predicted RBP	11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	ACOT4	Q8N9L9	421 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	GAB3	Q8WWW8	586 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	TANK	Q92844	425 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	FAM131C	Q96AQ9	280 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	NRBF2	Q96F24	287 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	RIPOR3	Q96MK2	946 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	DOK1	Q99704	481 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	FUNDC2	Q9BWH2	189 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	PRDM7	Q9NQW5	492 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	SELENON	Q9NZV5	590 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	TRPC4	Q9UBN4	977 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	TMA7	Q9Y2S6	64 aa	Known RBP	11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	SNX5	Q9Y5X3	404 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	ANHX	E9PGG2	379 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	ADAMDEC1	O15204	470 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	TFPT	P0C1Z6	253 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	ACADM	P11310	421 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	JUNB	P17275	347 aa	Predicted RBP	11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	TEAD1	P28347	426 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	ALDH4A1	P30038	563 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	XCR1	P46094	333 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	MASP1	P48740	699 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	ENTPD1	P49961	510 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	NUDT6	P53370	316 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	LSM3	P62310	102 aa	Known RBP	11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	LACC1	Q8IV20	430 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	FAR1	Q8WVX9	515 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	DNASE1L2	Q92874	299 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	AMDHD1	Q96NU7	426 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	RNF6	Q9Y252	685 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	PCDHGA10	Q9Y5H3	936 aa		11.5	□□□□□ -0.57
STRADA-222	ENST00000583085	TPST2	O60704	377 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	DNAJB6	O75190	326 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	MT-ND2	P03891	347 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	GRK3	P35626	688 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	TPMT	P51580	245 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	SLC35A2	P78381	396 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	IL18R1	Q13478	541 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	AQP6	Q13520	282 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	LEXM	Q3ZCV2	418 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	CCDC103	Q8IW40	242 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	SETD9	Q8NE22	299 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	UTP15	Q8TED0	518 aa	Known RBP	11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	DOK4	Q8TEW6	326 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	GEMIN6	Q8WXD5	167 aa	Known RBP	11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	CNRIP1	Q96F85	164 aa	Predicted RBP	11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	APOL4	Q9BPW4	351 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	C1QTNF7	Q9BXJ2	289 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	QRSL1	Q9H0R6	528 aa	Known RBP	11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	OR51I1	Q9H343	314 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	TRBV4-1	A0A0J9YWV2	114 aa		11.49	□□□□□ -0.57
STRADA-222	ENST00000583085	FAM20B	O75063	409 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms